Protein–RNA interactions for Protein: Q9NUM4

TMEM106B, Transmembrane protein 106B, humanhuman

Predictions only

Length 274 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106BQ9NUM4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
TMEM106BQ9NUM4 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 AC007322.4-201ENST00000509611 723 ntBASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
TMEM106BQ9NUM4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 PPP1R14BP3-201ENST00000509033 445 ntBASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC17.57■□□□□ 0.4
TMEM106BQ9NUM4 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
TMEM106BQ9NUM4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 GTPBP6-201ENST00000326153 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.55■□□□□ 0.4
TMEM106BQ9NUM4 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
TMEM106BQ9NUM4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms