Protein–RNA interactions for Protein: Q9NSU2

TREX1, Three-prime repair exonuclease 1, humanhuman

Predictions only

Length 369 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1Q9NSU2 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 AC120498.10-201ENST00000621827 505 ntBASIC20.77■□□□□ 0.92
TREX1Q9NSU2 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TREX1Q9NSU2 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
TREX1Q9NSU2 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TREX1Q9NSU2 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
TREX1Q9NSU2 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TREX1Q9NSU2 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 KRT18P20-201ENST00000548986 1279 ntBASIC20.76■□□□□ 0.91
TREX1Q9NSU2 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TREX1Q9NSU2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TREX1Q9NSU2 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 AC245052.3-201ENST00000450182 901 ntBASIC20.74■□□□□ 0.91
TREX1Q9NSU2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 LINC01521-201ENST00000504184 1943 ntBASIC20.74■□□□□ 0.91
TREX1Q9NSU2 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TREX1Q9NSU2 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 AC007225.1-201ENST00000566331 1836 ntBASIC20.73■□□□□ 0.91
TREX1Q9NSU2 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
TREX1Q9NSU2 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 HACD1-201ENST00000326961 773 ntTSL 2 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 AC097381.1-201ENST00000429019 1296 ntBASIC20.72■□□□□ 0.91
TREX1Q9NSU2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 GALNS-213ENST00000569433 723 ntTSL 3 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 LINC01006-201ENST00000333319 2292 ntBASIC20.72■□□□□ 0.91
TREX1Q9NSU2 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 AP005212.1-201ENST00000581547 1997 ntBASIC20.72■□□□□ 0.91
TREX1Q9NSU2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.72■□□□□ 0.91
TREX1Q9NSU2 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
TREX1Q9NSU2 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms