Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC10.78□□□□□ -0.68
CDC42SE1Q9NRR8 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 LINC01126-201ENST00000623515 1646 ntBASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC10.77□□□□□ -0.68
CDC42SE1Q9NRR8 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 BOP1-205ENST00000569669 2303 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 AC124067.4-201ENST00000519691 2379 ntBASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 AC093503.3-201ENST00000624917 2352 ntBASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
CDC42SE1Q9NRR8 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 LSR-205ENST00000427250 1606 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 AC046158.3-201ENST00000624947 2558 ntBASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 MVD-201ENST00000301012 1823 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 PLK5-205ENST00000642079 1969 ntBASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
CDC42SE1Q9NRR8 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 Z98882.1-201ENST00000622160 2253 ntBASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
CDC42SE1Q9NRR8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms