Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
POLE3Q9NRF9 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L2-201ENST00000561772 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L6-201ENST00000626483 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L1-201ENST00000627662 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L8-201ENST00000629013 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L3-201ENST00000630187 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L7-201ENST00000630678 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 DUX4L5-201ENST00000630834 1275 ntBASIC19.25■□□□□ 0.67
POLE3Q9NRF9 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
POLE3Q9NRF9 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 ZNRF2P3-201ENST00000424200 374 ntBASIC19.24■□□□□ 0.67
POLE3Q9NRF9 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 CCDC92B-201ENST00000575506 885 ntBASIC19.24■□□□□ 0.67
POLE3Q9NRF9 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.24■□□□□ 0.67
POLE3Q9NRF9 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 KRT18P14-201ENST00000534205 1250 ntBASIC19.23■□□□□ 0.67
POLE3Q9NRF9 KRT18P20-201ENST00000548986 1279 ntBASIC19.23■□□□□ 0.67
POLE3Q9NRF9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
POLE3Q9NRF9 AC121338.2-201ENST00000622535 1744 ntBASIC19.22■□□□□ 0.67
POLE3Q9NRF9 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 AC006128.1-201ENST00000624704 1661 ntBASIC19.22■□□□□ 0.67
POLE3Q9NRF9 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.22■□□□□ 0.67
POLE3Q9NRF9 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 TPSG1-201ENST00000234798 1108 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.21■□□□□ 0.67
POLE3Q9NRF9 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms