Protein–RNA interactions for Protein: Q9HD20

ATP13A1, Manganese-transporting ATPase 13A1, humanhuman

Predictions only

Length 1,204 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP13A1Q9HD20 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 FEM1AP4-201ENST00000443167 1987 ntBASIC21.32■■□□□ 1
ATP13A1Q9HD20 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 AC243732.1-201ENST00000612648 864 ntBASIC21.32■■□□□ 1
ATP13A1Q9HD20 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
ATP13A1Q9HD20 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.32■■□□□ 1
ATP13A1Q9HD20 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
ATP13A1Q9HD20 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC21.31■■□□□ 1
ATP13A1Q9HD20 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A1Q9HD20 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC21.31■■□□□ 1
ATP13A1Q9HD20 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
ATP13A1Q9HD20 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC21.31■■□□□ 1
ATP13A1Q9HD20 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 MIR663A-201ENST00000385250 93 ntBASIC21.3■■□□□ 1
ATP13A1Q9HD20 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 PARP1-210ENST00000629232 477 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
ATP13A1Q9HD20 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC21.3■■□□□ 1
ATP13A1Q9HD20 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
ATP13A1Q9HD20 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC21.29■■□□□ 1
ATP13A1Q9HD20 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 CROCCP5-201ENST00000436658 830 ntBASIC21.29■■□□□ 1
ATP13A1Q9HD20 AC006970.2-201ENST00000450065 779 ntBASIC21.29■■□□□ 1
ATP13A1Q9HD20 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 AC007322.4-201ENST00000509611 723 ntBASIC21.29■■□□□ 1
ATP13A1Q9HD20 AC005181.1-201ENST00000604782 1256 ntBASIC21.29■■□□□ 1
ATP13A1Q9HD20 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP13A1Q9HD20 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
ATP13A1Q9HD20 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
ATP13A1Q9HD20 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
ATP13A1Q9HD20 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A1Q9HD20 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A1Q9HD20 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC21.28■■□□□ 1
ATP13A1Q9HD20 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A1Q9HD20 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
ATP13A1Q9HD20 PALM-207ENST00000590161 2137 ntTSL 4 BASIC21.28■■□□□ 1
ATP13A1Q9HD20 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC21.27■■□□□ 1
ATP13A1Q9HD20 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
ATP13A1Q9HD20 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
ATP13A1Q9HD20 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A1Q9HD20 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A1Q9HD20 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.27■■□□□ 1
ATP13A1Q9HD20 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A1Q9HD20 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.27■■□□□ 1
ATP13A1Q9HD20 AL024507.2-201ENST00000606070 2574 ntBASIC21.27■□□□□ 0.99
ATP13A1Q9HD20 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC21.27■□□□□ 0.99
ATP13A1Q9HD20 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
ATP13A1Q9HD20 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC21.27■□□□□ 0.99
ATP13A1Q9HD20 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC21.27■□□□□ 0.99
ATP13A1Q9HD20 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
ATP13A1Q9HD20 AL137060.1-201ENST00000618151 2648 ntBASIC21.26■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms