Protein–RNA interactions for Protein: Q9HBG4

ATP6V0A4, V-type proton ATPase 116 kDa subunit a isoform 4, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0A4Q9HBG4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 APTR-203ENST00000430801 583 ntTSL 5 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 AL138781.1-201ENST00000566567 1274 ntBASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 AC068338.2-201ENST00000563278 1430 ntBASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC23.13■■□□□ 1.29
ATP6V0A4Q9HBG4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 AC105036.2-201ENST00000569468 176 ntBASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 AC133552.2-202ENST00000575694 574 ntBASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC23.12■■□□□ 1.29
ATP6V0A4Q9HBG4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 LINC00565-201ENST00000562710 2331 ntBASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 LIMS2-201ENST00000324938 2111 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 CYP2T1P-201ENST00000432607 1285 ntBASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC23.11■■□□□ 1.29
ATP6V0A4Q9HBG4 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 POC1B-209ENST00000549035 2038 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 EFS-203ENST00000429593 2610 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 KRT18P6-201ENST00000555540 1265 ntBASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
ATP6V0A4Q9HBG4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 BET1L-204ENST00000410108 637 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 KLF13-207ENST00000560473 489 ntTSL 3 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 AL591742.1-201ENST00000604433 565 ntBASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 TMEM191A-211ENST00000637163 1067 ntBASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.09■■□□□ 1.29
ATP6V0A4Q9HBG4 Z98882.1-201ENST00000622160 2253 ntBASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 AC091799.1-201ENST00000422823 811 ntBASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
ATP6V0A4Q9HBG4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
ATP6V0A4Q9HBG4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC23.07■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms