Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC20.87■□□□□ 0.93
VPS11Q9H270 AC133561.4-201ENST00000566112 224 ntBASIC20.87■□□□□ 0.93
VPS11Q9H270 AC233992.3-201ENST00000607491 485 ntBASIC20.87■□□□□ 0.93
VPS11Q9H270 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 STX5-203ENST00000394690 1568 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS11Q9H270 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS11Q9H270 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS11Q9H270 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
VPS11Q9H270 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS11Q9H270 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS11Q9H270 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC20.86■□□□□ 0.93
VPS11Q9H270 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS11Q9H270 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS11Q9H270 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 AC024257.2-201ENST00000549699 147 ntBASIC20.85■□□□□ 0.93
VPS11Q9H270 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS11Q9H270 AL136162.1-201ENST00000607711 1078 ntBASIC20.85■□□□□ 0.93
VPS11Q9H270 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VPS11Q9H270 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
VPS11Q9H270 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.85■□□□□ 0.93
VPS11Q9H270 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS11Q9H270 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS11Q9H270 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC20.84■□□□□ 0.93
VPS11Q9H270 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
VPS11Q9H270 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
VPS11Q9H270 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
VPS11Q9H270 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS11Q9H270 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
VPS11Q9H270 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS11Q9H270 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.83■□□□□ 0.93
VPS11Q9H270 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS11Q9H270 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS11Q9H270 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS11Q9H270 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC20.83■□□□□ 0.93
VPS11Q9H270 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
VPS11Q9H270 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
VPS11Q9H270 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.83■□□□□ 0.93
VPS11Q9H270 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
VPS11Q9H270 IGHV3-19-201ENST00000521488 291 ntBASIC20.83■□□□□ 0.93
VPS11Q9H270 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VPS11Q9H270 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
VPS11Q9H270 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC20.83■□□□□ 0.92
VPS11Q9H270 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
VPS11Q9H270 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.83■□□□□ 0.92
VPS11Q9H270 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
VPS11Q9H270 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
VPS11Q9H270 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS11Q9H270 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS11Q9H270 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS11Q9H270 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS11Q9H270 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.82■□□□□ 0.92
VPS11Q9H270 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.82■□□□□ 0.92
VPS11Q9H270 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.82■□□□□ 0.92
VPS11Q9H270 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.82■□□□□ 0.92
VPS11Q9H270 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
VPS11Q9H270 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms