Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
VPS16Q9H269 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC22.82■■□□□ 1.24
VPS16Q9H269 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC22.82■■□□□ 1.24
VPS16Q9H269 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC22.82■■□□□ 1.24
VPS16Q9H269 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC22.82■■□□□ 1.24
VPS16Q9H269 AL355001.2-201ENST00000620617 1191 ntBASIC22.82■■□□□ 1.24
VPS16Q9H269 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC22.82■■□□□ 1.24
VPS16Q9H269 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC22.82■■□□□ 1.24
VPS16Q9H269 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
VPS16Q9H269 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC22.82■■□□□ 1.24
VPS16Q9H269 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
VPS16Q9H269 ST3GAL4-209ENST00000526727 1967 ntAPPRIS ALT1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC22.81■■□□□ 1.24
VPS16Q9H269 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC22.81■■□□□ 1.24
VPS16Q9H269 AL391422.3-201ENST00000603791 2761 ntBASIC22.81■■□□□ 1.24
VPS16Q9H269 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 MIR939-201ENST00000401314 82 ntBASIC22.81■■□□□ 1.24
VPS16Q9H269 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC22.81■■□□□ 1.24
VPS16Q9H269 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.81■■□□□ 1.24
VPS16Q9H269 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC22.81■■□□□ 1.24
VPS16Q9H269 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
VPS16Q9H269 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC22.81■■□□□ 1.24
VPS16Q9H269 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC22.8■■□□□ 1.24
VPS16Q9H269 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.8■■□□□ 1.24
VPS16Q9H269 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC22.8■■□□□ 1.24
VPS16Q9H269 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC22.8■■□□□ 1.24
VPS16Q9H269 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC22.8■■□□□ 1.24
VPS16Q9H269 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC22.8■■□□□ 1.24
VPS16Q9H269 AC027702.1-201ENST00000563810 1770 ntBASIC22.8■■□□□ 1.24
VPS16Q9H269 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
VPS16Q9H269 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
VPS16Q9H269 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC22.79■■□□□ 1.24
VPS16Q9H269 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC22.79■■□□□ 1.24
VPS16Q9H269 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VPS16Q9H269 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VPS16Q9H269 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VPS16Q9H269 AL031432.3-201ENST00000607698 485 ntBASIC22.79■■□□□ 1.24
VPS16Q9H269 AL136967.2-201ENST00000623968 743 ntBASIC22.79■■□□□ 1.24
VPS16Q9H269 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC22.79■■□□□ 1.24
VPS16Q9H269 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.79■■□□□ 1.24
VPS16Q9H269 AC007225.1-201ENST00000566331 1836 ntBASIC22.79■■□□□ 1.24
VPS16Q9H269 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VPS16Q9H269 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC22.79■■□□□ 1.24
VPS16Q9H269 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
VPS16Q9H269 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC22.79■■□□□ 1.24
VPS16Q9H269 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC22.79■■□□□ 1.24
VPS16Q9H269 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.79■■□□□ 1.24
VPS16Q9H269 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC22.78■■□□□ 1.24
VPS16Q9H269 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC22.78■■□□□ 1.24
VPS16Q9H269 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 PCDHAC2-203ENST00000615316 3011 ntBASIC22.78■■□□□ 1.24
VPS16Q9H269 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.78■■□□□ 1.24
VPS16Q9H269 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC22.78■■□□□ 1.24
VPS16Q9H269 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.78■■□□□ 1.24
VPS16Q9H269 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC22.78■■□□□ 1.24
VPS16Q9H269 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
VPS16Q9H269 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS16Q9H269 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS16Q9H269 AC061975.6-201ENST00000579045 1553 ntBASIC22.77■■□□□ 1.24
VPS16Q9H269 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS16Q9H269 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
VPS16Q9H269 EBPL-204ENST00000378272 766 ntTSL 3 BASIC22.77■■□□□ 1.24
VPS16Q9H269 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.77■■□□□ 1.24
VPS16Q9H269 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC22.77■■□□□ 1.24
VPS16Q9H269 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC22.77■■□□□ 1.24
VPS16Q9H269 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC22.77■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms