Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 AKT1S1-206ENST00000391834 1849 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 AL031133.1-201ENST00000406807 723 ntBASIC20.15■□□□□ 0.82
SPTBN4Q9H254 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 MCRIP2P1-201ENST00000394346 511 ntBASIC20.15■□□□□ 0.82
SPTBN4Q9H254 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 CLN6-214ENST00000636314 442 ntTSL 3 BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
SPTBN4Q9H254 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPTBN4Q9H254 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.14■□□□□ 0.82
SPTBN4Q9H254 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
SPTBN4Q9H254 KRT18P16-201ENST00000510337 1294 ntBASIC20.14■□□□□ 0.82
SPTBN4Q9H254 AC022616.7-201ENST00000525383 220 ntBASIC20.14■□□□□ 0.82
SPTBN4Q9H254 AC053503.5-201ENST00000601508 636 ntBASIC20.14■□□□□ 0.82
SPTBN4Q9H254 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
SPTBN4Q9H254 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 AP006587.3-201ENST00000525742 1516 ntBASIC20.13■□□□□ 0.81
SPTBN4Q9H254 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 AC063952.2-201ENST00000498792 1227 ntBASIC20.13■□□□□ 0.81
SPTBN4Q9H254 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 AC087633.2-202ENST00000565166 1439 ntBASIC20.13■□□□□ 0.81
SPTBN4Q9H254 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
SPTBN4Q9H254 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 FAM197Y1-201ENST00000421178 764 ntBASIC20.12■□□□□ 0.81
SPTBN4Q9H254 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC20.12■□□□□ 0.81
SPTBN4Q9H254 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 PVRIG2P-201ENST00000435460 978 ntBASIC20.11■□□□□ 0.81
SPTBN4Q9H254 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC20.11■□□□□ 0.81
SPTBN4Q9H254 AC008175.2-201ENST00000612840 297 ntBASIC20.11■□□□□ 0.81
SPTBN4Q9H254 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 KCNIP2-206ENST00000356640 1989 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.1■□□□□ 0.81
SPTBN4Q9H254 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 FDX1P1-201ENST00000449115 551 ntBASIC20.09■□□□□ 0.81
SPTBN4Q9H254 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 AC073195.1-201ENST00000607241 877 ntBASIC20.09■□□□□ 0.81
SPTBN4Q9H254 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
SPTBN4Q9H254 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms