Protein–RNA interactions for Protein: Q9H0L4

CSTF2T, Cleavage stimulation factor subunit 2 tau variant, humanhuman

Known RBP eCLIP

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2TQ9H0L4 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.263e-7■■■■□ 21.7
CSTF2TQ9H0L4 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.263e-7■■■■□ 21.7
CSTF2TQ9H0L4 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.353e-7■■■■□ 21.7
CSTF2TQ9H0L4 CYTH1-217ENST00000592497 454 ntTSL 37.88□□□□□ -1.153e-7■■■■□ 21.7
CSTF2TQ9H0L4 INPPL1-209ENST00000540973 375 ntTSL 323.51■■□□□ 1.353e-8■■■■□ 21.7
CSTF2TQ9H0L4 NFIC-210ENST00000590282 1558 ntTSL 2 BASIC15.3■□□□□ 0.041e-6■■■■□ 21.7
CSTF2TQ9H0L4 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.031e-6■■■■□ 21.7
CSTF2TQ9H0L4 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC14.82□□□□□ -0.041e-6■■■■□ 21.7
CSTF2TQ9H0L4 NDST1-208ENST00000524161 437 ntTSL 214.42□□□□□ -0.11e-6■■■■□ 21.7
CSTF2TQ9H0L4 CCDC26-203ENST00000523151 1496 ntTSL 1 (best)8.26□□□□□ -1.094e-8■■■■□ 21.7
CSTF2TQ9H0L4 CCDC26-202ENST00000520048 904 ntTSL 37.78□□□□□ -1.164e-8■■■■□ 21.7
CSTF2TQ9H0L4 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC7.07□□□□□ -1.284e-8■■■■□ 21.7
CSTF2TQ9H0L4 WDR1-215ENST00000510848 554 ntTSL 415.52■□□□□ 0.083e-7■■■■□ 21.7
CSTF2TQ9H0L4 WDR1-212ENST00000508949 552 ntTSL 413.89□□□□□ -0.193e-7■■■■□ 21.7
CSTF2TQ9H0L4 WDR1-214ENST00000509695 467 ntTSL 413.49□□□□□ -0.253e-7■■■■□ 21.7
CSTF2TQ9H0L4 WDR1-208ENST00000505543 687 ntTSL 412.26□□□□□ -0.453e-7■■■■□ 21.7
CSTF2TQ9H0L4 ANKRD11-204ENST00000378332 1982 ntTSL 218.84■□□□□ 0.613e-7■■■■□ 21.7
CSTF2TQ9H0L4 DCUN1D4-207ENST00000504661 568 ntTSL 412.23□□□□□ -0.453e-28■■■■□ 21.7
CSTF2TQ9H0L4 TRIP12-203ENST00000389044 6405 ntTSL 1 (best) BASIC10.31□□□□□ -0.766e-10■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC29.58■■■□□ 2.332e-6■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-203ENST00000553512 636 ntTSL 520.43■□□□□ 0.862e-6■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-208ENST00000437404 1085 ntTSL 1 (best)19.37■□□□□ 0.695e-12■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.322e-6■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-205ENST00000554255 570 ntTSL 215.51■□□□□ 0.072e-6■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-206ENST00000554630 566 ntTSL 214.34□□□□□ -0.112e-6■■■■□ 21.7
CSTF2TQ9H0L4 ZFYVE21-210ENST00000556610 364 ntTSL 514.32□□□□□ -0.122e-6■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-202ENST00000347458 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.685e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-204ENST00000371792 3130 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.685e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-203ENST00000360426 3211 ntAPPRIS ALT2 TSL 1 (best) BASIC10.4□□□□□ -0.745e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-205ENST00000371802 3154 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.785e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-206ENST00000371828 3411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.54□□□□□ -0.885e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-201ENST00000340954 3334 ntAPPRIS ALT2 TSL 5 BASIC9.52□□□□□ -0.895e-12■■■■□ 21.7
CSTF2TQ9H0L4 STAU1-207ENST00000371856 3684 ntAPPRIS P4 TSL 1 (best) BASIC9.44□□□□□ -0.95e-12■■■■□ 21.7
CSTF2TQ9H0L4 LRRC59-202ENST00000503118 438 ntTSL 57.06□□□□□ -1.284e-17■■■■□ 21.7
CSTF2TQ9H0L4 RNF126-207ENST00000605891 1671 ntTSL 528.69■■■□□ 2.184e-8■■■■□ 21.7
CSTF2TQ9H0L4 RNF126-201ENST00000292363 1694 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.844e-8■■■■□ 21.7
CSTF2TQ9H0L4 RNF126-203ENST00000589762 963 ntTSL 224.34■■□□□ 1.494e-8■■■■□ 21.7
CSTF2TQ9H0L4 RNF126-205ENST00000591394 733 ntTSL 221.06■□□□□ 0.964e-8■■■■□ 21.7
CSTF2TQ9H0L4 RNF126-206ENST00000592626 652 ntTSL 217.73■□□□□ 0.434e-8■■■■□ 21.7
CSTF2TQ9H0L4 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.318e-7■■■■□ 21.7
CSTF2TQ9H0L4 CR1L-204ENST00000530905 930 ntTSL 519.7■□□□□ 0.744e-7■■■■□ 21.7
CSTF2TQ9H0L4 CR1L-203ENST00000508064 1788 ntAPPRIS P1 TSL 1 (best) BASIC10.55□□□□□ -0.724e-7■■■■□ 21.7
CSTF2TQ9H0L4 CSPP1-207ENST00000521919 567 ntAPPRIS ALT2 TSL 47.01□□□□□ -1.297e-9■■■■□ 21.7
CSTF2TQ9H0L4 CSPP1-204ENST00000519701 569 ntTSL 45.73□□□□□ -1.497e-9■■■■□ 21.7
CSTF2TQ9H0L4 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.697e-9■■■■□ 21.7
CSTF2TQ9H0L4 CSPP1-202ENST00000519163 3982 ntTSL 23.8□□□□□ -1.87e-9■■■■□ 21.7
CSTF2TQ9H0L4 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.813e-7■■■■□ 21.7
CSTF2TQ9H0L4 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.333e-7■■■■□ 21.7
CSTF2TQ9H0L4 IFITM10-203ENST00000482459 1563 ntTSL 1 (best)21.92■■□□□ 1.12e-6■■■■□ 21.7
CSTF2TQ9H0L4 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.826e-10■■■■□ 21.7
CSTF2TQ9H0L4 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.73e-7■■■■□ 21.7
CSTF2TQ9H0L4 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.623e-7■■■■□ 21.7
CSTF2TQ9H0L4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.52■□□□□ 0.073e-7■■■■□ 21.7
CSTF2TQ9H0L4 TEAD2-206ENST00000596757 579 ntTSL 514.63□□□□□ -0.073e-7■■■■□ 21.7
CSTF2TQ9H0L4 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.56□□□□□ -0.083e-7■■■■□ 21.7
CSTF2TQ9H0L4 SEPT5-203ENST00000406172 1996 ntTSL 521.85■■□□□ 1.092e-6■■■■□ 21.7
CSTF2TQ9H0L4 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.712e-6■■■■□ 21.7
CSTF2TQ9H0L4 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.96□□□□□ -0.012e-6■■■■□ 21.7
CSTF2TQ9H0L4 SEPT5-205ENST00000412544 1108 ntTSL 514.66□□□□□ -0.062e-6■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-210ENST00000455762 1022 ntTSL 517.63■□□□□ 0.414e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-201ENST00000333877 2228 ntTSL 216.47■□□□□ 0.234e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.45■□□□□ 0.224e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.094e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-207ENST00000431323 888 ntTSL 514.43□□□□□ -0.14e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.06□□□□□ -0.164e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-206ENST00000421397 574 ntTSL 513.84□□□□□ -0.194e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-208ENST00000443203 553 ntTSL 413□□□□□ -0.334e-8■■■■□ 21.7
CSTF2TQ9H0L4 NELFA-204ENST00000411649 561 ntTSL 411.13□□□□□ -0.634e-8■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-207ENST00000435198 1056 ntTSL 324.84■■□□□ 1.576e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.137e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-210ENST00000464036 1256 ntTSL 321.93■■□□□ 1.16e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.826e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-214ENST00000473215 1028 ntTSL 319.99■□□□□ 0.796e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-208ENST00000450390 2455 ntTSL 519.98■□□□□ 0.797e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-206ENST00000422076 643 ntTSL 519.86■□□□□ 0.776e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-219ENST00000503294 814 ntTSL 419.86■□□□□ 0.776e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.47■□□□□ 0.717e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-220ENST00000509720 472 ntTSL 317.86■□□□□ 0.456e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-211ENST00000466752 886 ntTSL 317.74■□□□□ 0.436e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-217ENST00000491779 611 ntTSL 217.74■□□□□ 0.436e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC17■□□□□ 0.316e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC16.14■□□□□ 0.176e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-218ENST00000502382 530 ntTSL 415.13■□□□□ 0.016e-7■■■■□ 21.7
CSTF2TQ9H0L4 UBE2J2-215ENST00000477894 767 ntTSL 514.87□□□□□ -0.036e-7■■■■□ 21.7
CSTF2TQ9H0L4 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.982e-7■■■■□ 21.7
CSTF2TQ9H0L4 ULK1-202ENST00000537421 959 ntTSL 311.68□□□□□ -0.542e-9■■■■□ 21.7
CSTF2TQ9H0L4 ADCY7-204ENST00000562623 333 ntTSL 219.97■□□□□ 0.792e-6■■■■□ 21.7
CSTF2TQ9H0L4 ADCY7-207ENST00000564965 578 ntTSL 414.23□□□□□ -0.132e-6■■■■□ 21.7
CSTF2TQ9H0L4 ADCY7-213ENST00000568933 170 ntTSL 314.13□□□□□ -0.152e-6■■■■□ 21.7
CSTF2TQ9H0L4 ADCY7-206ENST00000564044 575 ntTSL 313.89□□□□□ -0.192e-6■■■■□ 21.7
CSTF2TQ9H0L4 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC20.55■□□□□ 0.881e-6■■■■□ 21.7
CSTF2TQ9H0L4 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.12■□□□□ 0.815e-7■■■■□ 21.7
CSTF2TQ9H0L4 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC19.89■□□□□ 0.771e-6■■■■□ 21.7
CSTF2TQ9H0L4 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.681e-6■■■■□ 21.7
CSTF2TQ9H0L4 ORAI3-203ENST00000563161 976 ntTSL 317.98■□□□□ 0.471e-6■■■■□ 21.7
CSTF2TQ9H0L4 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.185e-7■■■■□ 21.7
CSTF2TQ9H0L4 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.772e-6■■■■□ 21.6
CSTF2TQ9H0L4 LTB4R-204ENST00000553481 431 ntTSL 213.18□□□□□ -0.32e-6■■■■□ 21.6
CSTF2TQ9H0L4 SLC22A18-210ENST00000492567 684 ntTSL 218.22■□□□□ 0.511e-7■■■■□ 21.6
CSTF2TQ9H0L4 NEU4-215ENST00000488997 541 ntTSL 420.5■□□□□ 0.872e-9■■■■□ 21.6
Retrieved 100 of 19,151 protein–RNA pairs in 208.4 ms