Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
PCDH11YQ9BZA8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC27.2■■□□□ 1.94
PCDH11YQ9BZA8 NXN-202ENST00000537628 1340 ntTSL 3 BASIC27.2■■□□□ 1.94
PCDH11YQ9BZA8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC27.19■■□□□ 1.94
PCDH11YQ9BZA8 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 REXO2-208ENST00000539754 791 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 MIR4497-201ENST00000583208 89 ntBASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
PCDH11YQ9BZA8 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC27.17■■□□□ 1.94
PCDH11YQ9BZA8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 KLF2-202ENST00000592003 564 ntTSL 3 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC27.16■■□□□ 1.94
PCDH11YQ9BZA8 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 POM121L13P-201ENST00000422362 380 ntBASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 SPIB-206ENST00000596074 847 ntTSL 2 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC27.15■■□□□ 1.94
PCDH11YQ9BZA8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 C1orf229-201ENST00000623686 2258 ntBASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
PCDH11YQ9BZA8 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC27.14■■□□□ 1.93
PCDH11YQ9BZA8 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC27.14■■□□□ 1.93
PCDH11YQ9BZA8 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDH11YQ9BZA8 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC27.14■■□□□ 1.93
PCDH11YQ9BZA8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC27.14■■□□□ 1.93
PCDH11YQ9BZA8 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 POTED-202ENST00000620442 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
PCDH11YQ9BZA8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC27.13■■□□□ 1.93
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms