Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 MOB1AP2-201ENST00000446060 614 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL359915.1-201ENST00000457719 898 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC02050-201ENST00000473938 712 ntTSL 3 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC015908.1-201ENST00000478739 476 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC093755.1-201ENST00000512950 1023 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC004052.1-201ENST00000514327 567 ntTSL 4 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 Y_RNA.688-201ENST00000516565 95 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC026688.1-201ENST00000520639 1168 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL355297.4-201ENST00000603191 1249 ntTSL 3 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC079779.3-218ENST00000612487 940 ntTSL 5 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC003001.2-201ENST00000616294 831 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 SRP19-208ENST00000621420 1270 ntTSL 3 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AC239585.2-202ENST00000624629 434 ntTSL 5 BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL121594.5-201ENST00000631724 573 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 ZCCHC9-202ENST00000380199 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 AL512283.1-201ENST00000606756 1384 ntBASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
KRTAP3-3Q9BYR6 HMGN2-201ENST00000361427 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 DYNC2LI1-204ENST00000406852 1133 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AL596247.1-201ENST00000416076 442 ntTSL 3 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 MTND2P5-201ENST00000432656 1006 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 TRIM60P9Y-201ENST00000438459 816 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 TRIM60P11Y-201ENST00000445313 801 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AL358075.1-201ENST00000450004 649 ntTSL 3 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AL162377.1-202ENST00000456688 1181 ntTSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC104164.3-201ENST00000467363 1258 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 MTND5P5-201ENST00000503764 376 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC010625.1-201ENST00000511296 403 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC034198.2-201ENST00000606447 510 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC087241.4-201ENST00000612441 480 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC006338.2-201ENST00000616864 791 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC126177.8-201ENST00000618339 1015 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC00115-201ENST00000473798 1317 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 GYG1-210ENST00000484197 1563 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 AC027514.1-201ENST00000588561 1603 ntBASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 KCTD13-202ENST00000561540 1773 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
KRTAP3-3Q9BYR6 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 HIGD1AP15-201ENST00000416198 280 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AC123595.1-201ENST00000440769 1046 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 NPM1P19-201ENST00000450070 712 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AL365203.1-201ENST00000450890 1048 ntTSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC02053-202ENST00000488262 940 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AGGF1P3-201ENST00000493675 1213 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 LINC01099-201ENST00000507011 512 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 GBP1P1-202ENST00000513638 1234 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 LRRTM2-203ENST00000521094 1182 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AL034376.2-201ENST00000568110 573 ntTSL 2 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 C18orf32-202ENST00000582392 714 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 ZNF235-203ENST00000589248 532 ntTSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 KLF16-203ENST00000592313 508 ntTSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AP000403.1-201ENST00000603349 851 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 AC079395.2-201ENST00000610982 737 ntBASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 MBD5-221ENST00000637159 902 ntTSL 5 BASIC12.75□□□□□ -0.37
KRTAP3-3Q9BYR6 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 AC018717.1-201ENST00000457712 1505 ntBASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 AL138831.3-201ENST00000623656 1458 ntBASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 MFSD8-220ENST00000641243 1422 ntBASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 SIRPB3P-201ENST00000340424 1216 ntBASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 MBD2-202ENST00000398398 1237 ntTSL 2 BASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 RPL35P3-201ENST00000403133 371 ntBASIC12.74□□□□□ -0.37
KRTAP3-3Q9BYR6 NRGN-202ENST00000412681 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms