Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 AC007375.3-201ENST00000600936 2314 ntBASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 WWC2-AS2-201ENST00000578387 2183 ntBASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC17.33■□□□□ 0.37
SSBP3Q9BWW4 AC068338.2-201ENST00000563278 1430 ntBASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 APTR-203ENST00000430801 583 ntTSL 5 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 CYP2T1P-201ENST00000432607 1285 ntBASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 AC083906.2-201ENST00000511578 360 ntBASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 AC008694.1-202ENST00000636953 945 ntBASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SSBP3Q9BWW4 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 OAS3-207ENST00000551007 998 ntTSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 AC069236.1-201ENST00000604339 616 ntBASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
SSBP3Q9BWW4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 SLC29A4P1-201ENST00000398760 971 ntBASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 AL355802.2-201ENST00000402069 882 ntBASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 AF201337.1-201ENST00000520239 748 ntBASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 AC133552.2-202ENST00000575694 574 ntBASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 AL591742.1-201ENST00000604433 565 ntBASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SSBP3Q9BWW4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 METTL15-202ENST00000403099 795 ntTSL 5 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 AC105036.2-201ENST00000569468 176 ntBASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SSBP3Q9BWW4 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 AL162412.1-201ENST00000567129 965 ntBASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SSBP3Q9BWW4 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 16.3 ms