Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
RNF5Q99942 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
RNF5Q99942 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.62■□□□□ 0.25
RNF5Q99942 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
RNF5Q99942 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF5Q99942 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
RNF5Q99942 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
RNF5Q99942 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC16.61■□□□□ 0.25
RNF5Q99942 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF5Q99942 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF5Q99942 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC16.6■□□□□ 0.25
RNF5Q99942 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF5Q99942 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC16.6■□□□□ 0.25
RNF5Q99942 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
RNF5Q99942 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF5Q99942 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
RNF5Q99942 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC16.6■□□□□ 0.25
RNF5Q99942 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
RNF5Q99942 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
RNF5Q99942 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
RNF5Q99942 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC16.59■□□□□ 0.25
RNF5Q99942 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC16.59■□□□□ 0.25
RNF5Q99942 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
RNF5Q99942 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC16.59■□□□□ 0.25
RNF5Q99942 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC16.59■□□□□ 0.25
RNF5Q99942 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
RNF5Q99942 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
RNF5Q99942 AC116050.2-201ENST00000612102 1779 ntBASIC16.59■□□□□ 0.25
RNF5Q99942 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.25
RNF5Q99942 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RNF5Q99942 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF5Q99942 CD44-222ENST00000526025 1052 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF5Q99942 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC16.58■□□□□ 0.24
RNF5Q99942 AC087623.3-201ENST00000607047 1098 ntBASIC16.58■□□□□ 0.24
RNF5Q99942 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC16.58■□□□□ 0.24
RNF5Q99942 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC16.58■□□□□ 0.24
RNF5Q99942 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RNF5Q99942 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.57■□□□□ 0.24
RNF5Q99942 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 PLK5-205ENST00000642079 1969 ntBASIC16.57■□□□□ 0.24
RNF5Q99942 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF5Q99942 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 RBM17P2-201ENST00000616397 1405 ntBASIC16.57■□□□□ 0.24
RNF5Q99942 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF5Q99942 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF5Q99942 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF5Q99942 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC16.57■□□□□ 0.24
RNF5Q99942 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC16.57■□□□□ 0.24
RNF5Q99942 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RNF5Q99942 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF5Q99942 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF5Q99942 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RNF5Q99942 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms