Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 GATM-206ENST00000558336 1522 ntTSL 2 BASIC13.86□□□□□ -0.19
LITAFQ99732 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
LITAFQ99732 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC13.86□□□□□ -0.19
LITAFQ99732 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC13.86□□□□□ -0.19
LITAFQ99732 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC13.86□□□□□ -0.19
LITAFQ99732 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC13.86□□□□□ -0.19
LITAFQ99732 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC13.86□□□□□ -0.19
LITAFQ99732 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
LITAFQ99732 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
LITAFQ99732 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC13.85□□□□□ -0.19
LITAFQ99732 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LITAFQ99732 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC13.85□□□□□ -0.19
LITAFQ99732 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC13.85□□□□□ -0.19
LITAFQ99732 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC13.85□□□□□ -0.19
LITAFQ99732 AL034346.1-201ENST00000568244 1277 ntBASIC13.85□□□□□ -0.19
LITAFQ99732 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
LITAFQ99732 HOXD4-201ENST00000306324 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 LENG1-201ENST00000222224 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
LITAFQ99732 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC13.84□□□□□ -0.19
LITAFQ99732 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
LITAFQ99732 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
LITAFQ99732 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
LITAFQ99732 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC13.84□□□□□ -0.19
LITAFQ99732 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
LITAFQ99732 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.83□□□□□ -0.19
LITAFQ99732 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.19
LITAFQ99732 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
LITAFQ99732 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LITAFQ99732 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
LITAFQ99732 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.83□□□□□ -0.19
LITAFQ99732 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 AC005332.7-201ENST00000614046 2005 ntBASIC13.83□□□□□ -0.2
LITAFQ99732 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
LITAFQ99732 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC13.83□□□□□ -0.2
LITAFQ99732 CLTA-206ENST00000466396 695 ntTSL 2 BASIC13.83□□□□□ -0.2
LITAFQ99732 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC13.83□□□□□ -0.2
LITAFQ99732 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 NEFHP1-201ENST00000412845 2629 ntBASIC13.83□□□□□ -0.2
LITAFQ99732 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
LITAFQ99732 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
LITAFQ99732 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms