Protein–RNA interactions for Protein: Q96PY6

NEK1, Serine/threonine-protein kinase Nek1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1Q96PY6 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 AC006128.1-201ENST00000624704 1661 ntBASIC24.61■■□□□ 1.53
NEK1Q96PY6 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC24.61■■□□□ 1.53
NEK1Q96PY6 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
NEK1Q96PY6 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.6■■□□□ 1.53
NEK1Q96PY6 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NEK1Q96PY6 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC24.6■■□□□ 1.53
NEK1Q96PY6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NEK1Q96PY6 PARL-206ENST00000435888 1098 ntTSL 5 BASIC24.6■■□□□ 1.53
NEK1Q96PY6 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC24.6■■□□□ 1.53
NEK1Q96PY6 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.6■■□□□ 1.53
NEK1Q96PY6 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
NEK1Q96PY6 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC24.6■■□□□ 1.53
NEK1Q96PY6 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
NEK1Q96PY6 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
NEK1Q96PY6 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NEK1Q96PY6 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC24.58■■□□□ 1.53
NEK1Q96PY6 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
NEK1Q96PY6 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
NEK1Q96PY6 AC245052.3-201ENST00000450182 901 ntBASIC24.58■■□□□ 1.53
NEK1Q96PY6 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC24.58■■□□□ 1.53
NEK1Q96PY6 SLC7A5P1-201ENST00000568957 537 ntBASIC24.58■■□□□ 1.53
NEK1Q96PY6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NEK1Q96PY6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
NEK1Q96PY6 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
NEK1Q96PY6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC24.58■■□□□ 1.52
NEK1Q96PY6 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
NEK1Q96PY6 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.52
NEK1Q96PY6 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 DNAJA4-202ENST00000394852 3116 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 KRT18P5-201ENST00000436075 1291 ntBASIC24.57■■□□□ 1.52
NEK1Q96PY6 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.57■■□□□ 1.52
NEK1Q96PY6 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.57■■□□□ 1.52
NEK1Q96PY6 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
NEK1Q96PY6 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC24.56■■□□□ 1.52
NEK1Q96PY6 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC24.56■■□□□ 1.52
NEK1Q96PY6 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC24.56■■□□□ 1.52
NEK1Q96PY6 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 TFG-210ENST00000620299 1289 ntTSL 5 BASIC24.56■■□□□ 1.52
NEK1Q96PY6 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC24.56■■□□□ 1.52
NEK1Q96PY6 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 AC011484.1-201ENST00000377652 1995 ntBASIC24.55■■□□□ 1.52
NEK1Q96PY6 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.55■■□□□ 1.52
NEK1Q96PY6 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC24.55■■□□□ 1.52
NEK1Q96PY6 UBE2DNL-204ENST00000602536 740 ntBASIC24.55■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms