Protein–RNA interactions for Protein: Q96KJ9

COX4I2, Cytochrome c oxidase subunit 4 isoform 2, mitochondrial, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COX4I2Q96KJ9 ID1-201ENST00000376105 1233 ntBASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 AC233992.3-201ENST00000607491 485 ntBASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 SMG8-203ENST00000578922 2178 ntBASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
COX4I2Q96KJ9 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 HES6-206ENST00000409574 738 ntTSL 2 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.12■□□□□ 0.65
COX4I2Q96KJ9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 TTLL1-201ENST00000266254 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 BX842568.3-201ENST00000418104 571 ntBASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
COX4I2Q96KJ9 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 AL031602.1-201ENST00000633169 911 ntBASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.1■□□□□ 0.65
COX4I2Q96KJ9 AC098818.2-201ENST00000564925 2320 ntBASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 ME2-218ENST00000640965 2476 ntTSL 5 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
COX4I2Q96KJ9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms