Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 AL512625.2-201ENST00000417533 625 ntBASIC17.46■□□□□ 0.39
TIMD4Q96H15 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMD4Q96H15 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMD4Q96H15 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 AL117328.2-201ENST00000624617 1940 ntBASIC17.45■□□□□ 0.38
TIMD4Q96H15 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 PLLP-204ENST00000569059 665 ntTSL 3 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 AC142086.2-201ENST00000569753 217 ntBASIC17.45■□□□□ 0.38
TIMD4Q96H15 MIR4758-201ENST00000577688 71 ntBASIC17.45■□□□□ 0.38
TIMD4Q96H15 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 AC016405.3-201ENST00000607710 860 ntBASIC17.45■□□□□ 0.38
TIMD4Q96H15 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 PAQR6-205ENST00000368270 1765 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TIMD4Q96H15 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMD4Q96H15 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 CASP6-205ENST00000505486 538 ntTSL 4 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 RARRES2P4-201ENST00000514074 484 ntBASIC17.44■□□□□ 0.38
TIMD4Q96H15 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 AC133041.1-202ENST00000642053 222 ntBASIC17.44■□□□□ 0.38
TIMD4Q96H15 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
TIMD4Q96H15 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMD4Q96H15 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 ISCU-212ENST00000547005 795 ntTSL 3 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 AL138781.1-201ENST00000566567 1274 ntBASIC17.43■□□□□ 0.38
TIMD4Q96H15 FAM21FP-204ENST00000608637 956 ntBASIC17.43■□□□□ 0.38
TIMD4Q96H15 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC17.43■□□□□ 0.38
TIMD4Q96H15 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
TIMD4Q96H15 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 MFF-203ENST00000349901 1716 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
TIMD4Q96H15 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
TIMD4Q96H15 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
TIMD4Q96H15 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
TIMD4Q96H15 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms