Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC24.64■■□□□ 1.53
DDX11Q96FC9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
DDX11Q96FC9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX11Q96FC9 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 PARP1-202ENST00000366792 553 ntTSL 3 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 GPX1P1-201ENST00000388829 606 ntBASIC24.63■■□□□ 1.53
DDX11Q96FC9 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 PALM-207ENST00000590161 2137 ntTSL 4 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 AP001160.3-201ENST00000601484 763 ntBASIC24.63■■□□□ 1.53
DDX11Q96FC9 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX11Q96FC9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
DDX11Q96FC9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX11Q96FC9 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC24.63■■□□□ 1.53
DDX11Q96FC9 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC24.63■■□□□ 1.53
DDX11Q96FC9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 UBE2DNL-204ENST00000602536 740 ntBASIC24.62■■□□□ 1.53
DDX11Q96FC9 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
DDX11Q96FC9 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC24.62■■□□□ 1.53
DDX11Q96FC9 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC24.61■■□□□ 1.53
DDX11Q96FC9 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.61■■□□□ 1.53
DDX11Q96FC9 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC24.6■■□□□ 1.53
DDX11Q96FC9 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 SERP1-208ENST00000491660 830 ntTSL 2 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC24.6■■□□□ 1.53
DDX11Q96FC9 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
DDX11Q96FC9 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 MAZ-216ENST00000616501 991 ntTSL 5 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 AC231657.2-201ENST00000624556 255 ntBASIC24.59■■□□□ 1.53
DDX11Q96FC9 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX11Q96FC9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
DDX11Q96FC9 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC24.59■■□□□ 1.53
DDX11Q96FC9 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX11Q96FC9 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX11Q96FC9 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX11Q96FC9 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX11Q96FC9 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 AC007322.1-201ENST00000426983 750 ntBASIC24.58■■□□□ 1.53
DDX11Q96FC9 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 DUX4L16-201ENST00000555130 1264 ntBASIC24.58■■□□□ 1.53
DDX11Q96FC9 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC24.58■■□□□ 1.53
DDX11Q96FC9 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC24.58■■□□□ 1.53
DDX11Q96FC9 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.58■■□□□ 1.52
DDX11Q96FC9 NARF-205ENST00000412079 1760 ntTSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms