Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 SERP1-208ENST00000491660 830 ntTSL 2 BASIC21.23■□□□□ 0.99
RTP4Q96DX8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC21.23■□□□□ 0.99
RTP4Q96DX8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC21.23■□□□□ 0.99
RTP4Q96DX8 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
RTP4Q96DX8 LINC02228-203ENST00000641970 1355 ntBASIC21.23■□□□□ 0.99
RTP4Q96DX8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RTP4Q96DX8 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.22■□□□□ 0.99
RTP4Q96DX8 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 KRT16P2-201ENST00000414673 1423 ntBASIC21.22■□□□□ 0.99
RTP4Q96DX8 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.22■□□□□ 0.99
RTP4Q96DX8 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 AC010141.2-201ENST00000452426 721 ntBASIC21.22■□□□□ 0.99
RTP4Q96DX8 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
RTP4Q96DX8 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
RTP4Q96DX8 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 AC123595.1-201ENST00000440769 1046 ntBASIC21.21■□□□□ 0.99
RTP4Q96DX8 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 RARRES2P11-201ENST00000635158 484 ntBASIC21.21■□□□□ 0.99
RTP4Q96DX8 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
RTP4Q96DX8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
RTP4Q96DX8 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
RTP4Q96DX8 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 BID-203ENST00000399765 1879 ntTSL 2 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
RTP4Q96DX8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC21.2■□□□□ 0.98
RTP4Q96DX8 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 AC027702.1-201ENST00000563810 1770 ntBASIC21.19■□□□□ 0.98
RTP4Q96DX8 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 TERF1P2-201ENST00000583350 1212 ntBASIC21.19■□□□□ 0.98
RTP4Q96DX8 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
RTP4Q96DX8 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 AC092667.1-201ENST00000434301 2586 ntBASIC21.19■□□□□ 0.98
RTP4Q96DX8 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
RTP4Q96DX8 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 NAA20-201ENST00000310450 920 ntTSL 2 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
RTP4Q96DX8 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
RTP4Q96DX8 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
RTP4Q96DX8 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms