Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC26.8■■□□□ 1.88
ZNF428Q96B54 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 METTL15-202ENST00000403099 795 ntTSL 5 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 GUSBP6-202ENST00000438529 1198 ntBASIC26.8■■□□□ 1.88
ZNF428Q96B54 APTR-205ENST00000447009 902 ntTSL 2 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
ZNF428Q96B54 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 AC098934.4-201ENST00000564127 592 ntBASIC26.8■■□□□ 1.88
ZNF428Q96B54 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 MDK-213ENST00000617138 635 ntTSL 2 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC26.8■■□□□ 1.88
ZNF428Q96B54 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 AC245052.3-201ENST00000450182 901 ntBASIC26.79■■□□□ 1.88
ZNF428Q96B54 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 PALM-207ENST00000590161 2137 ntTSL 4 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC26.79■■□□□ 1.88
ZNF428Q96B54 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 AC010536.3-201ENST00000620306 533 ntBASIC26.79■■□□□ 1.88
ZNF428Q96B54 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
ZNF428Q96B54 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF428Q96B54 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF428Q96B54 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF428Q96B54 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC26.78■■□□□ 1.88
ZNF428Q96B54 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
ZNF428Q96B54 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF428Q96B54 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF428Q96B54 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF428Q96B54 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC26.77■■□□□ 1.88
ZNF428Q96B54 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC26.77■■□□□ 1.88
ZNF428Q96B54 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC26.76■■□□□ 1.87
ZNF428Q96B54 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.76■■□□□ 1.87
ZNF428Q96B54 RBM17P2-201ENST00000616397 1405 ntBASIC26.76■■□□□ 1.87
ZNF428Q96B54 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC26.76■■□□□ 1.87
ZNF428Q96B54 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC26.76■■□□□ 1.87
ZNF428Q96B54 AL121832.2-201ENST00000610979 668 ntBASIC26.76■■□□□ 1.87
ZNF428Q96B54 AC231657.2-201ENST00000624556 255 ntBASIC26.76■■□□□ 1.87
ZNF428Q96B54 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZNF428Q96B54 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZNF428Q96B54 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC26.76■■□□□ 1.87
ZNF428Q96B54 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
ZNF428Q96B54 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC26.76■■□□□ 1.87
ZNF428Q96B54 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC26.75■■□□□ 1.87
ZNF428Q96B54 JDP2-202ENST00000419727 972 ntAPPRIS P1 TSL 2 BASIC26.75■■□□□ 1.87
ZNF428Q96B54 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 TSPY6P-201ENST00000448518 926 ntBASIC26.75■■□□□ 1.87
ZNF428Q96B54 KLF13-207ENST00000560473 489 ntTSL 3 BASIC26.75■■□□□ 1.87
ZNF428Q96B54 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 EXOC3-AS1-202ENST00000623673 1663 ntBASIC26.75■■□□□ 1.87
ZNF428Q96B54 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC26.75■■□□□ 1.87
ZNF428Q96B54 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
ZNF428Q96B54 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC26.74■■□□□ 1.87
ZNF428Q96B54 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC26.74■■□□□ 1.87
ZNF428Q96B54 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ZNF428Q96B54 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC26.73■■□□□ 1.87
ZNF428Q96B54 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 FGF8-207ENST00000618991 856 ntTSL 3 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZNF428Q96B54 AF106564.1-201ENST00000607058 2553 ntBASIC26.73■■□□□ 1.87
ZNF428Q96B54 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
ZNF428Q96B54 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC26.73■■□□□ 1.87
ZNF428Q96B54 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms