Protein–RNA interactions for Protein: Q96A61

TRIM52, Tripartite motif-containing protein 52, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM52Q96A61 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC30.85■■■□□ 2.53
TRIM52Q96A61 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 AC010980.2-201ENST00000587099 1412 ntBASIC30.84■■■□□ 2.53
TRIM52Q96A61 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 BX276092.2-201ENST00000417668 665 ntBASIC30.84■■■□□ 2.53
TRIM52Q96A61 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC30.84■■■□□ 2.53
TRIM52Q96A61 AC133041.1-202ENST00000642053 222 ntBASIC30.84■■■□□ 2.53
TRIM52Q96A61 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
TRIM52Q96A61 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC30.83■■■□□ 2.53
TRIM52Q96A61 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM52Q96A61 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM52Q96A61 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM52Q96A61 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC30.83■■■□□ 2.53
TRIM52Q96A61 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC30.83■■■□□ 2.53
TRIM52Q96A61 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC30.83■■■□□ 2.53
TRIM52Q96A61 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.53
TRIM52Q96A61 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM52Q96A61 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM52Q96A61 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC30.82■■■□□ 2.52
TRIM52Q96A61 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
TRIM52Q96A61 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM52Q96A61 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC30.82■■■□□ 2.52
TRIM52Q96A61 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC30.82■■■□□ 2.52
TRIM52Q96A61 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC30.82■■■□□ 2.52
TRIM52Q96A61 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC30.82■■■□□ 2.52
TRIM52Q96A61 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM52Q96A61 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 RGMA-211ENST00000557420 989 ntTSL 3 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 MIR4758-201ENST00000577688 71 ntBASIC30.81■■■□□ 2.52
TRIM52Q96A61 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
TRIM52Q96A61 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC30.81■■■□□ 2.52
TRIM52Q96A61 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 U2AF2-202ENST00000450554 3022 ntAPPRIS ALT1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 FBXW4P1-201ENST00000426721 2239 ntBASIC30.8■■■□□ 2.52
TRIM52Q96A61 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC30.8■■■□□ 2.52
TRIM52Q96A61 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
TRIM52Q96A61 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM52Q96A61 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM52Q96A61 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 PPP1R14BP2-201ENST00000426284 444 ntBASIC30.79■■■□□ 2.52
TRIM52Q96A61 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM52Q96A61 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 KRT18P6-201ENST00000555540 1265 ntBASIC30.79■■■□□ 2.52
TRIM52Q96A61 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
TRIM52Q96A61 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
TRIM52Q96A61 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
TRIM52Q96A61 STK25-234ENST00000535007 2459 ntTSL 2 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 AC073210.2-201ENST00000430369 194 ntBASIC30.78■■■□□ 2.52
TRIM52Q96A61 CDV3P1-201ENST00000471403 739 ntBASIC30.78■■■□□ 2.52
TRIM52Q96A61 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 CASP6-205ENST00000505486 538 ntTSL 4 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC30.78■■■□□ 2.52
TRIM52Q96A61 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM52Q96A61 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM52Q96A61 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
TRIM52Q96A61 AL355472.2-201ENST00000422958 438 ntBASIC30.77■■■□□ 2.52
TRIM52Q96A61 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC30.77■■■□□ 2.52
TRIM52Q96A61 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM52Q96A61 ISCU-212ENST00000547005 795 ntTSL 3 BASIC30.77■■■□□ 2.52
TRIM52Q96A61 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM52Q96A61 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
TRIM52Q96A61 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms