Protein–RNA interactions for Protein: Q93038

TNFRSF25, Tumor necrosis factor receptor superfamily member 25, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF25Q93038 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF25Q93038 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF25Q93038 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TNFRSF25Q93038 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TNFRSF25Q93038 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
TNFRSF25Q93038 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
TNFRSF25Q93038 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 AC010536.3-201ENST00000620306 533 ntBASIC23.7■■□□□ 1.38
TNFRSF25Q93038 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 AC011484.1-201ENST00000377652 1995 ntBASIC23.7■■□□□ 1.38
TNFRSF25Q93038 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC23.7■■□□□ 1.38
TNFRSF25Q93038 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 KRT18P11-201ENST00000435214 1283 ntBASIC23.69■■□□□ 1.38
TNFRSF25Q93038 CD44-222ENST00000526025 1052 ntTSL 2 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
TNFRSF25Q93038 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 AC006128.1-201ENST00000624704 1661 ntBASIC23.68■■□□□ 1.38
TNFRSF25Q93038 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC23.68■■□□□ 1.38
TNFRSF25Q93038 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 DUX4L16-201ENST00000555130 1264 ntBASIC23.67■■□□□ 1.38
TNFRSF25Q93038 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 IKBKGP1-201ENST00000612193 1073 ntBASIC23.67■■□□□ 1.38
TNFRSF25Q93038 AC011767.1-201ENST00000617410 1153 ntBASIC23.67■■□□□ 1.38
TNFRSF25Q93038 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC23.67■■□□□ 1.38
TNFRSF25Q93038 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 TERF1P5-201ENST00000477545 1207 ntBASIC23.66■■□□□ 1.38
TNFRSF25Q93038 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC23.66■■□□□ 1.38
TNFRSF25Q93038 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
TNFRSF25Q93038 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC23.65■■□□□ 1.38
TNFRSF25Q93038 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
TNFRSF25Q93038 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC23.65■■□□□ 1.38
TNFRSF25Q93038 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms