Protein–RNA interactions for Protein: Q92576

PHF3, PHD finger protein 3, humanhuman

Known RBP Predictions only

Length 2,039 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3Q92576 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
PHF3Q92576 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
PHF3Q92576 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.79■□□□□ 0.6
PHF3Q92576 Z98882.1-201ENST00000622160 2253 ntBASIC18.78■□□□□ 0.6
PHF3Q92576 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF3Q92576 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
PHF3Q92576 RBM17P2-201ENST00000616397 1405 ntBASIC18.78■□□□□ 0.6
PHF3Q92576 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 RNA5SP413-201ENST00000516373 109 ntBASIC18.78■□□□□ 0.6
PHF3Q92576 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.78■□□□□ 0.6
PHF3Q92576 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.78■□□□□ 0.6
PHF3Q92576 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF3Q92576 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
PHF3Q92576 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PHF3Q92576 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.78■□□□□ 0.6
PHF3Q92576 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.78■□□□□ 0.6
PHF3Q92576 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.78■□□□□ 0.6
PHF3Q92576 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PHF3Q92576 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF3Q92576 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF3Q92576 EFS-203ENST00000429593 2610 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF3Q92576 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
PHF3Q92576 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.77■□□□□ 0.6
PHF3Q92576 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.77■□□□□ 0.6
PHF3Q92576 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
PHF3Q92576 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PHF3Q92576 AF106564.1-201ENST00000607058 2553 ntBASIC18.77■□□□□ 0.59
PHF3Q92576 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHF3Q92576 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHF3Q92576 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.77■□□□□ 0.59
PHF3Q92576 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
PHF3Q92576 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 AC069236.1-201ENST00000604339 616 ntBASIC18.76■□□□□ 0.59
PHF3Q92576 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
PHF3Q92576 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC18.76■□□□□ 0.59
PHF3Q92576 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PHF3Q92576 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 RHEB-204ENST00000472642 900 ntTSL 3 BASIC18.76■□□□□ 0.59
PHF3Q92576 ISCU-212ENST00000547005 795 ntTSL 3 BASIC18.76■□□□□ 0.59
PHF3Q92576 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.76■□□□□ 0.59
PHF3Q92576 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
PHF3Q92576 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 AC244015.2-201ENST00000616358 1861 ntBASIC18.75■□□□□ 0.59
PHF3Q92576 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC18.75■□□□□ 0.59
PHF3Q92576 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.75■□□□□ 0.59
PHF3Q92576 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC18.75■□□□□ 0.59
PHF3Q92576 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC18.75■□□□□ 0.59
PHF3Q92576 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.75■□□□□ 0.59
PHF3Q92576 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.75■□□□□ 0.59
PHF3Q92576 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PHF3Q92576 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHF3Q92576 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.74■□□□□ 0.59
PHF3Q92576 DUSP5P2-201ENST00000426873 1033 ntBASIC18.74■□□□□ 0.59
PHF3Q92576 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
PHF3Q92576 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHF3Q92576 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PHF3Q92576 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
PHF3Q92576 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PHF3Q92576 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC18.74■□□□□ 0.59
PHF3Q92576 BX276092.2-201ENST00000417668 665 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms