Protein–RNA interactions for Protein: Q8WXC6

COPS9, COP9 signalosome complex subunit 9, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPS9Q8WXC6 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 HYI-210ENST00000486909 905 ntTSL 5 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 AC009831.1-201ENST00000580420 1582 ntBASIC14.08□□□□□ -0.16
COPS9Q8WXC6 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC14.08□□□□□ -0.16
COPS9Q8WXC6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 C1QTNF4-201ENST00000302514 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
COPS9Q8WXC6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 FER1L4-210ENST00000615531 5998 ntBASIC14.06□□□□□ -0.16
COPS9Q8WXC6 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
COPS9Q8WXC6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 AC004687.1-201ENST00000579003 1625 ntBASIC14.05□□□□□ -0.16
COPS9Q8WXC6 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC14.05□□□□□ -0.16
COPS9Q8WXC6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms