Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 IGFALS-201ENST00000215539 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 TCF3P1-201ENST00000423021 1937 ntBASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 NARF-205ENST00000412079 1760 ntTSL 5 BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MBD3L1Q8WWY6 AP000974.1-201ENST00000623909 2387 ntBASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 PI4KB-213ENST00000529142 2603 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 CLTA-206ENST00000466396 695 ntTSL 2 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 LRRK1-208ENST00000532029 1241 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
MBD3L1Q8WWY6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 RNF8-204ENST00000469731 1800 ntTSL 5 BASIC16.29■□□□□ 0.2
MBD3L1Q8WWY6 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 DUX4L18-201ENST00000553347 1267 ntBASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 AC137630.3-201ENST00000607245 391 ntBASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 STX5-203ENST00000394690 1568 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 AC138932.1-201ENST00000534164 6830 ntBASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 GATM-206ENST00000558336 1522 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 STX4-202ENST00000394998 1498 ntTSL 2 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC16.28■□□□□ 0.2
MBD3L1Q8WWY6 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 FP700111.2-201ENST00000619190 1892 ntBASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 BHLHE23-202ENST00000612929 1109 ntBASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
MBD3L1Q8WWY6 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.27■□□□□ 0.19
MBD3L1Q8WWY6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms