Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 AIRN-201ENST00000601203 4374 ntBASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 CRTC1-203ENST00000594658 2384 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
DNAAF1Q8NEP3 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 FAM151B-201ENST00000282226 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 ZNF517-207ENST00000531720 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 GABARAPL3-202ENST00000624044 1851 ntBASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC18.22■□□□□ 0.51
DNAAF1Q8NEP3 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 RARG-204ENST00000543726 1779 ntTSL 2 BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
DNAAF1Q8NEP3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.5
DNAAF1Q8NEP3 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 AP006587.3-201ENST00000525742 1516 ntBASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 AL136162.1-201ENST00000607711 1078 ntBASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
DNAAF1Q8NEP3 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 AC024257.2-201ENST00000549699 147 ntBASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 SMUG1P1-201ENST00000590640 811 ntBASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 AC135279.3-201ENST00000610945 1311 ntBASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 AFG3L1P-217ENST00000557444 2447 ntBASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
DNAAF1Q8NEP3 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
DNAAF1Q8NEP3 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms