Protein–RNA interactions for Protein: Q8NCR6

SMRP1, Spermatid-specific manchette-related protein 1, humanhuman

Predictions only

Length 262 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMRP1Q8NCR6 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC21.69■■□□□ 1.06
SMRP1Q8NCR6 HMGA2-203ENST00000393578 1993 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 AC239809.2-201ENST00000415381 517 ntBASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 PPOX-219ENST00000544598 813 ntTSL 2 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 AL023875.1-201ENST00000640777 796 ntBASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SMRP1Q8NCR6 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 AC113410.3-201ENST00000623366 203 ntBASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 NGLY1-204ENST00000396649 2024 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SMRP1Q8NCR6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 IKBIP-203ENST00000393042 1368 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 SNX21-213ENST00000614929 587 ntTSL 5 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SMRP1Q8NCR6 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 PTPA-214ENST00000423100 988 ntTSL 2 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC21.65■■□□□ 1.06
SMRP1Q8NCR6 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMRP1Q8NCR6 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMRP1Q8NCR6 NHLH1-201ENST00000302101 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
SMRP1Q8NCR6 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC21.64■■□□□ 1.06
SMRP1Q8NCR6 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 THEM4-205ENST00000489410 643 ntTSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 AL445228.2-201ENST00000605589 952 ntBASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 AC110285.5-201ENST00000611501 352 ntBASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
SMRP1Q8NCR6 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 AL355075.4-201ENST00000554988 638 ntBASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 C11orf96-202ENST00000528572 1834 ntBASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
SMRP1Q8NCR6 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.63■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms