Protein–RNA interactions for Protein: Q8N228

SCML4, Sex comb on midleg-like protein 4, humanhuman

Predictions only

Length 414 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCML4Q8N228 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCML4Q8N228 AL512625.2-201ENST00000417533 625 ntBASIC21.71■■□□□ 1.07
SCML4Q8N228 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
SCML4Q8N228 CASP6-205ENST00000505486 538 ntTSL 4 BASIC21.71■■□□□ 1.07
SCML4Q8N228 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.71■■□□□ 1.07
SCML4Q8N228 RARRES2P4-201ENST00000514074 484 ntBASIC21.71■■□□□ 1.07
SCML4Q8N228 TK2-208ENST00000545043 1120 ntTSL 2 BASIC21.71■■□□□ 1.07
SCML4Q8N228 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCML4Q8N228 AC116050.2-201ENST00000612102 1779 ntBASIC21.71■■□□□ 1.07
SCML4Q8N228 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCML4Q8N228 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
SCML4Q8N228 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
SCML4Q8N228 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC21.7■■□□□ 1.07
SCML4Q8N228 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCML4Q8N228 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCML4Q8N228 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCML4Q8N228 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
SCML4Q8N228 ARL5A-202ENST00000428992 747 ntTSL 2 BASIC21.7■■□□□ 1.06
SCML4Q8N228 AC006970.2-201ENST00000450065 779 ntBASIC21.7■■□□□ 1.06
SCML4Q8N228 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
SCML4Q8N228 AC069236.1-201ENST00000604339 616 ntBASIC21.7■■□□□ 1.06
SCML4Q8N228 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC21.7■■□□□ 1.06
SCML4Q8N228 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC21.7■■□□□ 1.06
SCML4Q8N228 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC21.69■■□□□ 1.06
SCML4Q8N228 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 AC007322.3-201ENST00000426526 701 ntBASIC21.69■■□□□ 1.06
SCML4Q8N228 OAS3-207ENST00000551007 998 ntTSL 2 BASIC21.69■■□□□ 1.06
SCML4Q8N228 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC21.69■■□□□ 1.06
SCML4Q8N228 AC016405.3-201ENST00000607710 860 ntBASIC21.69■■□□□ 1.06
SCML4Q8N228 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC21.69■■□□□ 1.06
SCML4Q8N228 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC21.69■■□□□ 1.06
SCML4Q8N228 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
SCML4Q8N228 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
SCML4Q8N228 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.68■■□□□ 1.06
SCML4Q8N228 AC026310.3-201ENST00000625186 2373 ntBASIC21.68■■□□□ 1.06
SCML4Q8N228 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
SCML4Q8N228 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC21.68■■□□□ 1.06
SCML4Q8N228 MAP2K4P1-201ENST00000438453 1195 ntBASIC21.68■■□□□ 1.06
SCML4Q8N228 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC21.68■■□□□ 1.06
SCML4Q8N228 AL121832.2-201ENST00000610979 668 ntBASIC21.68■■□□□ 1.06
SCML4Q8N228 AC100791.3-201ENST00000617619 330 ntBASIC21.68■■□□□ 1.06
SCML4Q8N228 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC21.68■■□□□ 1.06
SCML4Q8N228 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCML4Q8N228 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
SCML4Q8N228 FAM83D-201ENST00000619304 2475 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
SCML4Q8N228 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC21.67■■□□□ 1.06
SCML4Q8N228 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SCML4Q8N228 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC21.67■■□□□ 1.06
SCML4Q8N228 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC21.67■■□□□ 1.06
SCML4Q8N228 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC21.67■■□□□ 1.06
SCML4Q8N228 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC21.67■■□□□ 1.06
SCML4Q8N228 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC21.67■■□□□ 1.06
SCML4Q8N228 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
SCML4Q8N228 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
SCML4Q8N228 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC21.66■■□□□ 1.06
SCML4Q8N228 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC21.66■■□□□ 1.06
SCML4Q8N228 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.66■■□□□ 1.06
SCML4Q8N228 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.66■■□□□ 1.06
SCML4Q8N228 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
SCML4Q8N228 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
SCML4Q8N228 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
SCML4Q8N228 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC21.66■■□□□ 1.06
SCML4Q8N228 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.66■■□□□ 1.06
SCML4Q8N228 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCML4Q8N228 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC21.65■■□□□ 1.06
SCML4Q8N228 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.65■■□□□ 1.06
SCML4Q8N228 AC011484.1-201ENST00000377652 1995 ntBASIC21.65■■□□□ 1.06
SCML4Q8N228 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC21.65■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms