Protein–RNA interactions for Protein: Q8IY18

SMC5, Structural maintenance of chromosomes protein 5, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5Q8IY18 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMC5Q8IY18 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMC5Q8IY18 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMC5Q8IY18 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SMC5Q8IY18 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 ZSWIM7-205ENST00000472495 703 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 AC104187.1-201ENST00000607510 612 ntBASIC25.78■■□□□ 1.72
SMC5Q8IY18 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
SMC5Q8IY18 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SMC5Q8IY18 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 SP2-202ENST00000613139 908 ntTSL 5 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SMC5Q8IY18 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC25.77■■□□□ 1.72
SMC5Q8IY18 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
SMC5Q8IY18 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC25.76■■□□□ 1.72
SMC5Q8IY18 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC25.76■■□□□ 1.72
SMC5Q8IY18 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMC5Q8IY18 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMC5Q8IY18 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 RAMP1-203ENST00000404910 857 ntTSL 2 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 ZNRF2P3-201ENST00000424200 374 ntBASIC25.76■■□□□ 1.71
SMC5Q8IY18 CCDC92B-201ENST00000575506 885 ntBASIC25.76■■□□□ 1.71
SMC5Q8IY18 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SMC5Q8IY18 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
SMC5Q8IY18 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
SMC5Q8IY18 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC25.76■■□□□ 1.71
SMC5Q8IY18 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 RAB43-208ENST00000615093 783 ntTSL 5 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC25.75■■□□□ 1.71
SMC5Q8IY18 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
SMC5Q8IY18 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMC5Q8IY18 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
SMC5Q8IY18 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMC5Q8IY18 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L2-201ENST00000561772 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L6-201ENST00000626483 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L1-201ENST00000627662 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L8-201ENST00000629013 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L3-201ENST00000630187 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L7-201ENST00000630678 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 DUX4L5-201ENST00000630834 1275 ntBASIC25.74■■□□□ 1.71
SMC5Q8IY18 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
SMC5Q8IY18 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
SMC5Q8IY18 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC25.73■■□□□ 1.71
SMC5Q8IY18 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC25.73■■□□□ 1.71
SMC5Q8IY18 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC25.73■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms