Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 AP001330.3-201ENST00000520123 633 ntBASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.28
MRPL55Q7Z7F7 RASA4CP-201ENST00000424092 1398 ntBASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 STX5-203ENST00000394690 1568 ntTSL 5 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 AC091305.1-201ENST00000479476 895 ntBASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 BX005040.4-201ENST00000637145 1518 ntBASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
MRPL55Q7Z7F7 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 HCG11-201ENST00000411553 5696 ntBASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 AC005224.4-201ENST00000583262 1652 ntBASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
MRPL55Q7Z7F7 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 MIR572-201ENST00000384983 95 ntBASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 AF213884.3-201ENST00000563833 479 ntBASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 MAG-206ENST00000597035 542 ntTSL 4 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 SLC25A24-204ENST00000569674 2357 ntBASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 AC055733.4-201ENST00000638462 1354 ntBASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
MRPL55Q7Z7F7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
MRPL55Q7Z7F7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms