Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LYSMD3Q7Z3D4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
LYSMD3Q7Z3D4 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
LYSMD3Q7Z3D4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD3Q7Z3D4 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LYSMD3Q7Z3D4 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 AC011767.1-201ENST00000617410 1153 ntBASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 BID-214ENST00000617586 542 ntTSL 5 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC20.89■□□□□ 0.93
LYSMD3Q7Z3D4 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 ZNF302-209ENST00000507959 854 ntTSL 2 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LYSMD3Q7Z3D4 TEAD2-208ENST00000598810 2191 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 SLC25A22-216ENST00000531214 1790 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 AC010536.3-201ENST00000620306 533 ntBASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 RARRES2P11-201ENST00000635158 484 ntBASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 RBM17P2-201ENST00000616397 1405 ntBASIC20.87■□□□□ 0.93
LYSMD3Q7Z3D4 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 AC245052.3-201ENST00000450182 901 ntBASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 VPS53-216ENST00000574029 585 ntTSL 4 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 AC005229.4-201ENST00000610085 2198 ntBASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 AL121603.2-201ENST00000557373 2117 ntBASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.86■□□□□ 0.93
LYSMD3Q7Z3D4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 AL049796.1-201ENST00000565336 1766 ntBASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 UQCRFS1P1-201ENST00000435169 820 ntBASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LYSMD3Q7Z3D4 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LYSMD3Q7Z3D4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms