Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 UNC93B3-201ENST00000308076 687 ntBASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 MIR4767-201ENST00000582827 78 ntBASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
PTCHD4Q6ZW05 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 PCDHAC2-203ENST00000615316 3011 ntBASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
PTCHD4Q6ZW05 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
PTCHD4Q6ZW05 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 AC131212.1-201ENST00000613771 668 ntBASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 FPGS-202ENST00000373228 1383 ntTSL 5 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.04■□□□□ 0.64
PTCHD4Q6ZW05 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 BX842568.3-201ENST00000418104 571 ntBASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 AC024257.2-201ENST00000549699 147 ntBASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
PTCHD4Q6ZW05 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms