Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 SUDS3P1-201ENST00000505831 966 ntBASIC21.15■□□□□ 0.98
CASC4Q6P4E1 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 AC142381.2-201ENST00000566120 298 ntBASIC21.15■□□□□ 0.98
CASC4Q6P4E1 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
CASC4Q6P4E1 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CASC4Q6P4E1 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC21.14■□□□□ 0.98
CASC4Q6P4E1 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CASC4Q6P4E1 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
CASC4Q6P4E1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
CASC4Q6P4E1 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 AC012414.1-201ENST00000556676 535 ntBASIC21.14■□□□□ 0.97
CASC4Q6P4E1 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 ZNF513-202ENST00000407879 2077 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
CASC4Q6P4E1 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 AL354811.1-201ENST00000610286 706 ntBASIC21.13■□□□□ 0.97
CASC4Q6P4E1 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CASC4Q6P4E1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 MED17-221ENST00000639724 2317 ntTSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 AC006128.1-201ENST00000624704 1661 ntBASIC21.12■□□□□ 0.97
CASC4Q6P4E1 PLK5-205ENST00000642079 1969 ntBASIC21.12■□□□□ 0.97
CASC4Q6P4E1 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 AC073130.3-201ENST00000624389 2278 ntBASIC21.12■□□□□ 0.97
CASC4Q6P4E1 SPATA5L1-201ENST00000305560 2570 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 NT5C3AP1-201ENST00000394500 1012 ntBASIC21.12■□□□□ 0.97
CASC4Q6P4E1 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 AC127029.2-201ENST00000577329 502 ntTSL 3 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 LINC01006-201ENST00000333319 2292 ntBASIC21.12■□□□□ 0.97
CASC4Q6P4E1 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 GPRIN2-202ENST00000374317 1966 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.12■□□□□ 0.97
CASC4Q6P4E1 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC21.11■□□□□ 0.97
CASC4Q6P4E1 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 LINC01521-201ENST00000504184 1943 ntBASIC21.1■□□□□ 0.97
CASC4Q6P4E1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 NME4-202ENST00000382940 766 ntTSL 3 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC21.1■□□□□ 0.97
CASC4Q6P4E1 NME4-211ENST00000620944 1193 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms