Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 CD99P1-205ENST00000527459 561 ntBASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 AC098934.4-201ENST00000564127 592 ntBASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC19.23■□□□□ 0.67
H3F3CQ6NXT2 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
H3F3CQ6NXT2 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 TMEM259-201ENST00000333175 2581 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 BX276092.2-201ENST00000417668 665 ntBASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 CDV3P1-201ENST00000471403 739 ntBASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
H3F3CQ6NXT2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 CA7-201ENST00000338437 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 AC100791.3-201ENST00000617619 330 ntBASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC19.2■□□□□ 0.66
H3F3CQ6NXT2 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 AL117328.2-201ENST00000624617 1940 ntBASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 ABHD17AP1-201ENST00000358206 933 ntBASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 ISCU-212ENST00000547005 795 ntTSL 3 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.19■□□□□ 0.66
H3F3CQ6NXT2 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 PKD1P6-201ENST00000343738 4769 ntBASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
H3F3CQ6NXT2 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.17■□□□□ 0.66
H3F3CQ6NXT2 LSR-203ENST00000360798 1963 ntTSL 2 BASIC19.17■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms