Protein–RNA interactions for Protein: Q6NVH7

SWSAP1, ATPase SWSAP1, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SWSAP1Q6NVH7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 MIR4758-201ENST00000577688 71 ntBASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 FAM21FP-204ENST00000608637 956 ntBASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
SWSAP1Q6NVH7 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 AC073210.2-201ENST00000430369 194 ntBASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 AC007128.1-201ENST00000424460 1853 ntTSL 5 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 SLC10A3-201ENST00000263512 2161 ntAPPRIS P3 TSL 2 BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
SWSAP1Q6NVH7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.31
SWSAP1Q6NVH7 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 PALM-207ENST00000590161 2137 ntTSL 4 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC23.2■■□□□ 1.3
SWSAP1Q6NVH7 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 ARL6IP4-220ENST00000543566 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 PPP1R14BP2-201ENST00000426284 444 ntBASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 VMO1-204ENST00000441199 741 ntTSL 2 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC23.19■■□□□ 1.3
SWSAP1Q6NVH7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 BID-212ENST00000614949 1988 ntTSL 5 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 ISCU-212ENST00000547005 795 ntTSL 3 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
SWSAP1Q6NVH7 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 AL355472.2-201ENST00000422958 438 ntBASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 AC007322.3-201ENST00000426526 701 ntBASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 AC092118.2-201ENST00000613495 667 ntBASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC23.17■■□□□ 1.3
SWSAP1Q6NVH7 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 Z98882.1-201ENST00000622160 2253 ntBASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 KRT18P6-201ENST00000555540 1265 ntBASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
SWSAP1Q6NVH7 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms