Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 MIR4758-201ENST00000577688 71 ntBASIC18.76■□□□□ 0.59
RTL6Q6ICC9 AC069236.1-201ENST00000604339 616 ntBASIC18.76■□□□□ 0.59
RTL6Q6ICC9 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RTL6Q6ICC9 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 AC008694.1-202ENST00000636953 945 ntBASIC18.75■□□□□ 0.59
RTL6Q6ICC9 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.75■□□□□ 0.59
RTL6Q6ICC9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 AC026471.6-201ENST00000622954 1905 ntBASIC18.74■□□□□ 0.59
RTL6Q6ICC9 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.74■□□□□ 0.59
RTL6Q6ICC9 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
RTL6Q6ICC9 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 RHOT1-205ENST00000545287 2516 ntAPPRIS P4 TSL 5 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 MYB-221ENST00000527615 2381 ntTSL 5 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 AC243732.1-201ENST00000612648 864 ntBASIC18.73■□□□□ 0.59
RTL6Q6ICC9 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
RTL6Q6ICC9 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 AL591742.1-201ENST00000604433 565 ntBASIC18.72■□□□□ 0.59
RTL6Q6ICC9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
RTL6Q6ICC9 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.71■□□□□ 0.59
RTL6Q6ICC9 AL162412.1-201ENST00000567129 965 ntBASIC18.71■□□□□ 0.59
RTL6Q6ICC9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms