Protein–RNA interactions for Protein: Q5VT28

FAM27B, Protein FAM27A/B/C, humanhuman

Predictions only

Length 67 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM27BQ5VT28 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 AC006128.1-201ENST00000624704 1661 ntBASIC18.2■□□□□ 0.5
FAM27BQ5VT28 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 MIR5787-201ENST00000611784 55 ntBASIC18.2■□□□□ 0.5
FAM27BQ5VT28 AC243732.1-201ENST00000612648 864 ntBASIC18.2■□□□□ 0.5
FAM27BQ5VT28 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 AC011484.1-201ENST00000377652 1995 ntBASIC18.2■□□□□ 0.5
FAM27BQ5VT28 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC18.2■□□□□ 0.5
FAM27BQ5VT28 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
FAM27BQ5VT28 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 RBM17P2-201ENST00000616397 1405 ntBASIC18.18■□□□□ 0.5
FAM27BQ5VT28 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 KRT18P11-201ENST00000435214 1283 ntBASIC18.18■□□□□ 0.5
FAM27BQ5VT28 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 UBE2DNL-204ENST00000602536 740 ntBASIC18.18■□□□□ 0.5
FAM27BQ5VT28 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
FAM27BQ5VT28 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 STX7-201ENST00000367937 1090 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 GXYLT1P2-201ENST00000433312 1230 ntBASIC18.17■□□□□ 0.5
FAM27BQ5VT28 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 DBI-210ENST00000542275 757 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 MYCNOS-205ENST00000641950 531 ntBASIC18.17■□□□□ 0.5
FAM27BQ5VT28 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
FAM27BQ5VT28 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
FAM27BQ5VT28 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms