Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NEURL3-201ENST00000310865 1710 ntTSL 1 (best) BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC34.45■■■■□ 3.11
SNAPC4Q5SXM2 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC34.45■■■■□ 3.1
SNAPC4Q5SXM2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC34.45■■■■□ 3.1
SNAPC4Q5SXM2 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC34.45■■■■□ 3.1
SNAPC4Q5SXM2 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 NT5C-211ENST00000582170 653 ntTSL 3 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC34.44■■■■□ 3.1
SNAPC4Q5SXM2 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 FAIM-201ENST00000338446 1622 ntTSL 5 BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 KRASP1-201ENST00000407852 552 ntBASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 HES2-205ENST00000487437 968 ntTSL 3 BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 RARRES2P10-201ENST00000564312 460 ntBASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.43■■■■□ 3.1
SNAPC4Q5SXM2 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 PRKY-204ENST00000533551 1019 ntBASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC34.42■■■■□ 3.1
SNAPC4Q5SXM2 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC34.41■■■■□ 3.1
SNAPC4Q5SXM2 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC34.41■■■■□ 3.1
SNAPC4Q5SXM2 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC34.4■■■■□ 3.1
SNAPC4Q5SXM2 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 AC110285.5-201ENST00000611501 352 ntBASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 AC007322.3-201ENST00000426526 701 ntBASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 PWWP2A-205ENST00000523662 1819 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 NXN-202ENST00000537628 1340 ntTSL 3 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 AC003102.1-202ENST00000563394 1796 ntBASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC34.39■■■■□ 3.1
SNAPC4Q5SXM2 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 PTPA-214ENST00000423100 988 ntTSL 2 BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC34.38■■■■□ 3.09
SNAPC4Q5SXM2 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC34.37■■■■□ 3.09
SNAPC4Q5SXM2 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 GRAP-204ENST00000573099 846 ntTSL 3 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC34.36■■■■□ 3.09
SNAPC4Q5SXM2 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC34.36■■■■□ 3.09
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms