Protein–RNA interactions for Protein: Q53EL6

PDCD4, Programmed cell death protein 4, humanhuman

Known RBP Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4Q53EL6 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
PDCD4Q53EL6 AC005224.4-201ENST00000583262 1652 ntBASIC19.94■□□□□ 0.78
PDCD4Q53EL6 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 UNC93B3-201ENST00000308076 687 ntBASIC19.93■□□□□ 0.78
PDCD4Q53EL6 AL136116.3-201ENST00000402907 1138 ntBASIC19.93■□□□□ 0.78
PDCD4Q53EL6 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 AICDA-202ENST00000537228 667 ntTSL 5 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
PDCD4Q53EL6 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 AC020907.5-201ENST00000624372 1936 ntBASIC19.92■□□□□ 0.78
PDCD4Q53EL6 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 PRADC1-201ENST00000258083 1083 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
PDCD4Q53EL6 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 BX005040.4-201ENST00000637145 1518 ntBASIC19.91■□□□□ 0.78
PDCD4Q53EL6 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
PDCD4Q53EL6 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
PDCD4Q53EL6 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
PDCD4Q53EL6 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms