Protein–RNA interactions for Protein: Q4G0I0

CCSMST1, Protein CCSMST1, humanhuman

Predictions only

Length 132 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSMST1Q4G0I0 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 ARSA-205ENST00000453344 1650 ntTSL 2 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
CCSMST1Q4G0I0 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 AC245052.3-201ENST00000450182 901 ntBASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 AL137784.2-201ENST00000607332 1000 ntBASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 EXOC3-AS1-202ENST00000623673 1663 ntBASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC20.21■□□□□ 0.83
CCSMST1Q4G0I0 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CCSMST1Q4G0I0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.2■□□□□ 0.83
CCSMST1Q4G0I0 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 DUX4L16-201ENST00000555130 1264 ntBASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 BID-214ENST00000617586 542 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.2■□□□□ 0.82
CCSMST1Q4G0I0 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 PLK5-205ENST00000642079 1969 ntBASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CCSMST1Q4G0I0 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 BMP1-204ENST00000397814 836 ntTSL 4 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 AC091799.1-201ENST00000422823 811 ntBASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 TERF1P5-201ENST00000477545 1207 ntBASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CCSMST1Q4G0I0 ZNF48-201ENST00000320159 3234 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.17■□□□□ 0.82
CCSMST1Q4G0I0 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms