Protein–RNA interactions for Protein: Q3MJ40

CCDC144B, Coiled-coil domain-containing protein 144B, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144BQ3MJ40 BMP1-204ENST00000397814 836 ntTSL 4 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 AC073210.2-201ENST00000430369 194 ntBASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 TERF1P5-201ENST00000477545 1207 ntBASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 SLC7A5P1-201ENST00000568957 537 ntBASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 AC013268.1-206ENST00000638368 961 ntBASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 AC112229.1-201ENST00000639295 961 ntBASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC24.11■■□□□ 1.45
CCDC144BQ3MJ40 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 AC053503.5-201ENST00000601508 636 ntBASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 AP006587.3-201ENST00000525742 1516 ntBASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
CCDC144BQ3MJ40 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 AC068338.2-201ENST00000563278 1430 ntBASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
CCDC144BQ3MJ40 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 AC066615.1-201ENST00000640911 628 ntBASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
CCDC144BQ3MJ40 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC144BQ3MJ40 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC24.08■■□□□ 1.44
CCDC144BQ3MJ40 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 AL157384.1-201ENST00000445995 2473 ntBASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
CCDC144BQ3MJ40 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 MGST3-205ENST00000367889 1015 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 AF106564.1-201ENST00000607058 2553 ntBASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 AC244015.2-201ENST00000616358 1861 ntBASIC24.06■■□□□ 1.44
CCDC144BQ3MJ40 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 CYP2T1P-201ENST00000432607 1285 ntBASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 TBCB-214ENST00000629269 413 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC24.05■■□□□ 1.44
CCDC144BQ3MJ40 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms