Protein–RNA interactions for Protein: Q12872

SFSWAP, Splicing factor, suppressor of white-apricot homolog, humanhuman

Known RBP Predictions only

Length 951 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAPQ12872 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
SFSWAPQ12872 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC21.06■□□□□ 0.96
SFSWAPQ12872 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC21.06■□□□□ 0.96
SFSWAPQ12872 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
SFSWAPQ12872 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 ABHD17AP1-201ENST00000358206 933 ntBASIC21.05■□□□□ 0.96
SFSWAPQ12872 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 KLF13-207ENST00000560473 489 ntTSL 3 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 STK25-234ENST00000535007 2459 ntTSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 AC061975.6-201ENST00000579045 1553 ntBASIC21.05■□□□□ 0.96
SFSWAPQ12872 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC21.05■□□□□ 0.96
SFSWAPQ12872 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
SFSWAPQ12872 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 CDV3P1-201ENST00000471403 739 ntBASIC21.04■□□□□ 0.96
SFSWAPQ12872 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.04■□□□□ 0.96
SFSWAPQ12872 AC016405.3-201ENST00000607710 860 ntBASIC21.04■□□□□ 0.96
SFSWAPQ12872 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SFSWAPQ12872 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 PPP1R14BP2-201ENST00000426284 444 ntBASIC21.03■□□□□ 0.96
SFSWAPQ12872 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 RARRES2P4-201ENST00000514074 484 ntBASIC21.03■□□□□ 0.96
SFSWAPQ12872 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SFSWAPQ12872 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 ISCU-212ENST00000547005 795 ntTSL 3 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SFSWAPQ12872 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC21.03■□□□□ 0.96
SFSWAPQ12872 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SFSWAPQ12872 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SFSWAPQ12872 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SFSWAPQ12872 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC21.02■□□□□ 0.96
SFSWAPQ12872 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC21.02■□□□□ 0.96
SFSWAPQ12872 MARS-234ENST00000630571 216 ntTSL 5 BASIC21.02■□□□□ 0.96
SFSWAPQ12872 MARS-235ENST00000630803 183 ntTSL 3 BASIC21.02■□□□□ 0.96
SFSWAPQ12872 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.02■□□□□ 0.96
SFSWAPQ12872 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SFSWAPQ12872 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.02■□□□□ 0.95
SFSWAPQ12872 GPRC5B-210ENST00000569847 1830 ntAPPRIS P2 TSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 HLA-G-204ENST00000376828 1490 ntAPPRIS ALT2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 BX276092.2-201ENST00000417668 665 ntBASIC21.01■□□□□ 0.95
SFSWAPQ12872 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 FAM201B-201ENST00000458407 597 ntBASIC21.01■□□□□ 0.95
SFSWAPQ12872 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
SFSWAPQ12872 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SFSWAPQ12872 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SFSWAPQ12872 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21■□□□□ 0.95
SFSWAPQ12872 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
SFSWAPQ12872 AC097658.1-201ENST00000475555 843 ntBASIC21■□□□□ 0.95
SFSWAPQ12872 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC21■□□□□ 0.95
SFSWAPQ12872 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms