Protein–RNA interactions for Protein: Q04338

VTI1, t-SNARE VTI1, yeastyeast

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VTI1Q04338 YAL066WYAL066W 309 nt2.66□□□□□ -1.98
VTI1Q04338 YLR347W-AYLR347W-A 141 nt2.66□□□□□ -1.98
VTI1Q04338 FMP41YNL168C 780 nt2.66□□□□□ -1.98
VTI1Q04338 YNL226WYNL226W 411 nt2.66□□□□□ -1.98
VTI1Q04338 RPL25YOL127W 429 nt2.66□□□□□ -1.98
VTI1Q04338 YLR001CYLR001C 2589 nt2.66□□□□□ -1.98
VTI1Q04338 YEF3YLR249W 3135 nt2.65□□□□□ -1.98
VTI1Q04338 PTP3YER075C 2787 nt2.65□□□□□ -1.99
VTI1Q04338 YKR078WYKR078W 1758 nt2.65□□□□□ -1.99
VTI1Q04338 NOP56YLR197W 1515 nt2.65□□□□□ -1.99
VTI1Q04338 YRB1YDR002W 606 nt2.65□□□□□ -1.99
VTI1Q04338 YGR050CYGR050C 357 nt2.65□□□□□ -1.99
VTI1Q04338 YBL029C-AYBL029C-A 285 nt2.65□□□□□ -1.99
VTI1Q04338 YNL046WYNL046W 519 nt2.65□□□□□ -1.99
VTI1Q04338 snR35snR35 204 nt2.65□□□□□ -1.99
VTI1Q04338 RGL1YPL066W 1440 nt2.65□□□□□ -1.99
VTI1Q04338 VPS13YLL040C 9435 nt2.64□□□□□ -1.99
VTI1Q04338 RPN9YDR427W 1182 nt2.64□□□□□ -1.99
VTI1Q04338 YER079C-AYER079C-A 339 nt2.64□□□□□ -1.99
VTI1Q04338 COG2YGR120C 789 nt2.64□□□□□ -1.99
VTI1Q04338 YGR293CYGR293C 462 nt2.64□□□□□ -1.99
VTI1Q04338 BET3YKR068C 582 nt2.64□□□□□ -1.99
VTI1Q04338 CBP6YBR120C 489 nt2.64□□□□□ -1.99
VTI1Q04338 UTP15YMR093W 1542 nt2.63□□□□□ -1.99
VTI1Q04338 MLH1YMR167W 2310 nt2.63□□□□□ -1.99
VTI1Q04338 YIL080WYIL080W 4722 nt2.63□□□□□ -1.99
VTI1Q04338 snR76snR76 109 nt2.63□□□□□ -1.99
VTI1Q04338 MEI4YER044C-A 1227 nt2.63□□□□□ -1.99
VTI1Q04338 VMA10YHR039C-A 345 nt2.63□□□□□ -1.99
VTI1Q04338 SEC28YIL076W 891 nt2.63□□□□□ -1.99
VTI1Q04338 YJL202CYJL202C 348 nt2.63□□□□□ -1.99
VTI1Q04338 SMD3YLR147C 306 nt2.63□□□□□ -1.99
VTI1Q04338 MST28YAR033W 705 nt2.63□□□□□ -1.99
VTI1Q04338 SLM4YBR077C 489 nt2.63□□□□□ -1.99
VTI1Q04338 YBR209WYBR209W 318 nt2.63□□□□□ -1.99
VTI1Q04338 NUP100YKL068W 2880 nt2.63□□□□□ -1.99
VTI1Q04338 SVL3YPL032C 2478 nt2.62□□□□□ -1.99
VTI1Q04338 HOS4YIL112W 3252 nt2.62□□□□□ -1.99
VTI1Q04338 CBS2YDR197W 1170 nt2.62□□□□□ -1.99
VTI1Q04338 YMR31YFR049W 372 nt2.62□□□□□ -1.99
VTI1Q04338 YGL117WYGL117W 798 nt2.62□□□□□ -1.99
VTI1Q04338 YHL006W-AYHL006W-A 354 nt2.62□□□□□ -1.99
VTI1Q04338 YKR070WYKR070W 1059 nt2.62□□□□□ -1.99
VTI1Q04338 DLT1YMR126C 1029 nt2.62□□□□□ -1.99
VTI1Q04338 MRPL17YNL252C 846 nt2.62□□□□□ -1.99
VTI1Q04338 VPS64YDR200C 1815 nt2.62□□□□□ -1.99
VTI1Q04338 PBS2YJL128C 2007 nt2.62□□□□□ -1.99
VTI1Q04338 DSE1YER124C 1722 nt2.62□□□□□ -1.99
VTI1Q04338 YFR057WYFR057W 456 nt2.61□□□□□ -1.99
VTI1Q04338 YHL044WYHL044W 708 nt2.61□□□□□ -1.99
VTI1Q04338 YLR154W-EYLR154W-E 204 nt2.61□□□□□ -1.99
VTI1Q04338 YLR307C-AYLR307C-A 264 nt2.61□□□□□ -1.99
VTI1Q04338 YMR194C-AYMR194C-A 225 nt2.61□□□□□ -1.99
VTI1Q04338 MER1YNL210W 813 nt2.61□□□□□ -1.99
VTI1Q04338 HUA2YOR284W 732 nt2.61□□□□□ -1.99
VTI1Q04338 TYE7YOR344C 876 nt2.61□□□□□ -1.99
VTI1Q04338 NPR3YHL023C 3441 nt2.61□□□□□ -1.99
VTI1Q04338 NUM1YDR150W 8247 nt2.6□□□□□ -1.99
VTI1Q04338 STE11YLR362W 2154 nt2.6□□□□□ -1.99
VTI1Q04338 YPR097WYPR097W 3222 nt2.6□□□□□ -1.99
VTI1Q04338 RGA2YDR379W 3030 nt2.6□□□□□ -1.99
VTI1Q04338 HRD3YLR207W 2502 nt2.6□□□□□ -1.99
VTI1Q04338 FUS1YCL027W 1539 nt2.6□□□□□ -1.99
VTI1Q04338 YER107W-AYER107W-A 321 nt2.6□□□□□ -1.99
VTI1Q04338 YHR032W-AYHR032W-A 180 nt2.6□□□□□ -1.99
VTI1Q04338 COX3Q0275 810 nt2.6□□□□□ -1.99
VTI1Q04338 SAS2YMR127C 1017 nt2.6□□□□□ -1.99
VTI1Q04338 YOR050CYOR050C 348 nt2.6□□□□□ -1.99
VTI1Q04338 snR191snR191 274 nt2.6□□□□□ -1.99
VTI1Q04338 YDR186CYDR186C 2634 nt2.6□□□□□ -1.99
VTI1Q04338 YDR170W-AYDR170W-A 1323 nt2.6□□□□□ -1.99
VTI1Q04338 YBL005W-AYBL005W-A 1323 nt2.6□□□□□ -1.99
VTI1Q04338 YMR046CYMR046C 1323 nt2.6□□□□□ -1.99
VTI1Q04338 YNL284C-AYNL284C-A 1323 nt2.6□□□□□ -1.99
VTI1Q04338 YGL176CYGL176C 1665 nt2.6□□□□□ -1.99
VTI1Q04338 PEX18YHR160C 852 nt2.59□□□□□ -1.99
VTI1Q04338 YIL156W-BYIL156W-B 222 nt2.59□□□□□ -1.99
VTI1Q04338 YJL047C-AYJL047C-A 135 nt2.59□□□□□ -1.99
VTI1Q04338 PET191YJR034W 327 nt2.59□□□□□ -1.99
VTI1Q04338 RNP1YLL046C 750 nt2.59□□□□□ -1.99
VTI1Q04338 RPB8YOR224C 441 nt2.59□□□□□ -1.99
VTI1Q04338 ATP3YBR039W 936 nt2.59□□□□□ -1.99
VTI1Q04338 SPF1YEL031W 3648 nt2.59□□□□□ -2
VTI1Q04338 YDR098C-BYDR098C-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YDR210C-DYDR210C-D 5268 nt2.59□□□□□ -2
VTI1Q04338 YDR316W-BYDR316W-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YDR365W-BYDR365W-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YER138CYER138C 5268 nt2.59□□□□□ -2
VTI1Q04338 YER160CYER160C 5268 nt2.59□□□□□ -2
VTI1Q04338 YGR038C-BYGR038C-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YGR161C-DYGR161C-D 5268 nt2.59□□□□□ -2
VTI1Q04338 YJR027WYJR027W 5268 nt2.59□□□□□ -2
VTI1Q04338 YLR157C-BYLR157C-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YML039WYML039W 5268 nt2.59□□□□□ -2
VTI1Q04338 YML045WYML045W 5268 nt2.59□□□□□ -2
VTI1Q04338 YMR050CYMR050C 5268 nt2.59□□□□□ -2
VTI1Q04338 YOL103W-BYOL103W-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YBR012W-BYBR012W-B 5271 nt2.59□□□□□ -2
VTI1Q04338 YOR142W-BYOR142W-B 5268 nt2.59□□□□□ -2
VTI1Q04338 YPL257W-BYPL257W-B 5268 nt2.59□□□□□ -2
Retrieved 100 of 7,029 protein–RNA pairs in 21.2 ms