Protein–RNA interactions for Protein: P78324

SIRPA, Tyrosine-protein phosphatase non-receptor type substrate 1, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPAP78324 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
SIRPAP78324 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SIRPAP78324 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
SIRPAP78324 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC18.92■□□□□ 0.62
SIRPAP78324 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC18.92■□□□□ 0.62
SIRPAP78324 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.92■□□□□ 0.62
SIRPAP78324 AP001160.3-201ENST00000601484 763 ntBASIC18.92■□□□□ 0.62
SIRPAP78324 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
SIRPAP78324 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SIRPAP78324 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC18.92■□□□□ 0.62
SIRPAP78324 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC18.91■□□□□ 0.62
SIRPAP78324 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC18.91■□□□□ 0.62
SIRPAP78324 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC18.91■□□□□ 0.62
SIRPAP78324 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC18.91■□□□□ 0.62
SIRPAP78324 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC18.91■□□□□ 0.62
SIRPAP78324 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.91■□□□□ 0.62
SIRPAP78324 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC18.91■□□□□ 0.62
SIRPAP78324 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SIRPAP78324 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC18.9■□□□□ 0.62
SIRPAP78324 AC106738.1-201ENST00000560487 359 ntTSL 3 BASIC18.9■□□□□ 0.62
SIRPAP78324 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC18.9■□□□□ 0.62
SIRPAP78324 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 MFF-203ENST00000349901 1716 ntTSL 2 BASIC18.9■□□□□ 0.62
SIRPAP78324 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.9■□□□□ 0.62
SIRPAP78324 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
SIRPAP78324 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SIRPAP78324 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC18.89■□□□□ 0.62
SIRPAP78324 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
SIRPAP78324 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
SIRPAP78324 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC18.89■□□□□ 0.61
SIRPAP78324 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC18.89■□□□□ 0.61
SIRPAP78324 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 KRT18P11-201ENST00000435214 1283 ntBASIC18.89■□□□□ 0.61
SIRPAP78324 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.89■□□□□ 0.61
SIRPAP78324 FAM71E1-204ENST00000600100 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 UBE2DNL-204ENST00000602536 740 ntBASIC18.89■□□□□ 0.61
SIRPAP78324 AC011767.1-201ENST00000617410 1153 ntBASIC18.89■□□□□ 0.61
SIRPAP78324 AC073111.5-205ENST00000641717 521 ntBASIC18.89■□□□□ 0.61
SIRPAP78324 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.89■□□□□ 0.61
SIRPAP78324 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SIRPAP78324 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SIRPAP78324 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC18.88■□□□□ 0.61
SIRPAP78324 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.88■□□□□ 0.61
SIRPAP78324 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC18.88■□□□□ 0.61
SIRPAP78324 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.88■□□□□ 0.61
SIRPAP78324 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC18.88■□□□□ 0.61
SIRPAP78324 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC18.88■□□□□ 0.61
SIRPAP78324 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.88■□□□□ 0.61
SIRPAP78324 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SIRPAP78324 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 PARP1-202ENST00000366792 553 ntTSL 3 BASIC18.87■□□□□ 0.61
SIRPAP78324 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC18.87■□□□□ 0.61
SIRPAP78324 AL157384.1-201ENST00000445995 2473 ntBASIC18.87■□□□□ 0.61
SIRPAP78324 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC18.87■□□□□ 0.61
SIRPAP78324 GNAO1-211ENST00000570235 568 ntTSL 2 BASIC18.87■□□□□ 0.61
SIRPAP78324 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
SIRPAP78324 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms