Protein–RNA interactions for Protein: P56704

WNT3A, Protein Wnt-3a, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
WNT3AP56704 UBE2DNL-204ENST00000602536 740 ntBASIC21.01■□□□□ 0.95
WNT3AP56704 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 PLK5-205ENST00000642079 1969 ntBASIC21.01■□□□□ 0.95
WNT3AP56704 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
WNT3AP56704 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC21■□□□□ 0.95
WNT3AP56704 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
WNT3AP56704 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 AL162430.1-201ENST00000480705 870 ntBASIC21■□□□□ 0.95
WNT3AP56704 DBI-210ENST00000542275 757 ntTSL 5 BASIC21■□□□□ 0.95
WNT3AP56704 SLC7A5P1-201ENST00000568957 537 ntBASIC21■□□□□ 0.95
WNT3AP56704 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC21■□□□□ 0.95
WNT3AP56704 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC21■□□□□ 0.95
WNT3AP56704 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
WNT3AP56704 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC21■□□□□ 0.95
WNT3AP56704 AC121338.2-201ENST00000622535 1744 ntBASIC21■□□□□ 0.95
WNT3AP56704 HABP4-201ENST00000375249 2615 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC21■□□□□ 0.95
WNT3AP56704 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21■□□□□ 0.95
WNT3AP56704 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.99■□□□□ 0.95
WNT3AP56704 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 STX7-201ENST00000367937 1090 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC20.99■□□□□ 0.95
WNT3AP56704 SNRNP25-202ENST00000383018 1085 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 GXYLT1P2-201ENST00000433312 1230 ntBASIC20.99■□□□□ 0.95
WNT3AP56704 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.99■□□□□ 0.95
WNT3AP56704 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC20.99■□□□□ 0.95
WNT3AP56704 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.99■□□□□ 0.95
WNT3AP56704 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC20.99■□□□□ 0.95
WNT3AP56704 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
WNT3AP56704 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
WNT3AP56704 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC20.98■□□□□ 0.95
WNT3AP56704 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC20.98■□□□□ 0.95
WNT3AP56704 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 MIR935-201ENST00000401179 91 ntBASIC20.98■□□□□ 0.95
WNT3AP56704 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.98■□□□□ 0.95
WNT3AP56704 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.98■□□□□ 0.95
WNT3AP56704 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC20.98■□□□□ 0.95
WNT3AP56704 FGF8-207ENST00000618991 856 ntTSL 3 BASIC20.98■□□□□ 0.95
WNT3AP56704 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
WNT3AP56704 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.97■□□□□ 0.95
WNT3AP56704 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
WNT3AP56704 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.97■□□□□ 0.95
WNT3AP56704 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC20.97■□□□□ 0.95
WNT3AP56704 PARP1-202ENST00000366792 553 ntTSL 3 BASIC20.97■□□□□ 0.95
WNT3AP56704 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.97■□□□□ 0.95
WNT3AP56704 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.97■□□□□ 0.95
WNT3AP56704 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.97■□□□□ 0.95
WNT3AP56704 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 MYCNOS-205ENST00000641950 531 ntBASIC20.97■□□□□ 0.95
WNT3AP56704 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
WNT3AP56704 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
WNT3AP56704 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.96■□□□□ 0.95
WNT3AP56704 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms