Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC20.22■□□□□ 0.83
AP1S2P56377 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
AP1S2P56377 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC20.22■□□□□ 0.83
AP1S2P56377 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC20.21■□□□□ 0.83
AP1S2P56377 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 ERF-202ENST00000440177 2032 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S2P56377 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC20.21■□□□□ 0.83
AP1S2P56377 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC20.21■□□□□ 0.83
AP1S2P56377 AC026271.2-201ENST00000428091 497 ntBASIC20.21■□□□□ 0.83
AP1S2P56377 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S2P56377 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S2P56377 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC20.21■□□□□ 0.83
AP1S2P56377 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 OR10C1-203ENST00000444197 1672 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
AP1S2P56377 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.21■□□□□ 0.83
AP1S2P56377 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC20.21■□□□□ 0.83
AP1S2P56377 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
AP1S2P56377 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 AC006128.1-201ENST00000624704 1661 ntBASIC20.2■□□□□ 0.82
AP1S2P56377 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
AP1S2P56377 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 AC243732.1-201ENST00000612648 864 ntBASIC20.2■□□□□ 0.82
AP1S2P56377 TFG-210ENST00000620299 1289 ntTSL 5 BASIC20.2■□□□□ 0.82
AP1S2P56377 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
AP1S2P56377 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC20.2■□□□□ 0.82
AP1S2P56377 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
AP1S2P56377 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
AP1S2P56377 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 AC011484.1-201ENST00000377652 1995 ntBASIC20.19■□□□□ 0.82
AP1S2P56377 PLK5-205ENST00000642079 1969 ntBASIC20.19■□□□□ 0.82
AP1S2P56377 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
AP1S2P56377 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
AP1S2P56377 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC20.19■□□□□ 0.82
AP1S2P56377 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
AP1S2P56377 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
AP1S2P56377 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
AP1S2P56377 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC20.19■□□□□ 0.82
AP1S2P56377 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC20.19■□□□□ 0.82
AP1S2P56377 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S2P56377 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC20.18■□□□□ 0.82
AP1S2P56377 NUP160-203ENST00000526870 1537 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S2P56377 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.18■□□□□ 0.82
AP1S2P56377 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
AP1S2P56377 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S2P56377 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
AP1S2P56377 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
AP1S2P56377 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 AC090360.1-201ENST00000569722 2218 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
AP1S2P56377 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S2P56377 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC20.18■□□□□ 0.82
AP1S2P56377 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
AP1S2P56377 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC20.18■□□□□ 0.82
AP1S2P56377 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
AP1S2P56377 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
AP1S2P56377 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
AP1S2P56377 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.17■□□□□ 0.82
AP1S2P56377 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC20.17■□□□□ 0.82
AP1S2P56377 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S2P56377 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC20.17■□□□□ 0.82
AP1S2P56377 F2RL3-202ENST00000599210 613 ntTSL 2 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 16.2 ms