Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC15.24■□□□□ 0.03
APOC4P55056 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC15.24■□□□□ 0.03
APOC4P55056 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 SEPT1-201ENST00000321367 1592 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APOC4P55056 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC15.24■□□□□ 0.03
APOC4P55056 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 UBE2I-205ENST00000402301 1708 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC15.24■□□□□ 0.03
APOC4P55056 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC15.24■□□□□ 0.03
APOC4P55056 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.24■□□□□ 0.03
APOC4P55056 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC15.24■□□□□ 0.03
APOC4P55056 RARRES2P4-201ENST00000514074 484 ntBASIC15.24■□□□□ 0.03
APOC4P55056 PHB2-213ENST00000546111 858 ntTSL 2 BASIC15.24■□□□□ 0.03
APOC4P55056 PLLP-204ENST00000569059 665 ntTSL 3 BASIC15.24■□□□□ 0.03
APOC4P55056 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC15.24■□□□□ 0.03
APOC4P55056 FAM21FP-204ENST00000608637 956 ntBASIC15.24■□□□□ 0.03
APOC4P55056 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC15.24■□□□□ 0.03
APOC4P55056 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
APOC4P55056 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
APOC4P55056 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC15.23■□□□□ 0.03
APOC4P55056 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.23■□□□□ 0.03
APOC4P55056 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC15.23■□□□□ 0.03
APOC4P55056 APTR-205ENST00000447009 902 ntTSL 2 BASIC15.23■□□□□ 0.03
APOC4P55056 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.23■□□□□ 0.03
APOC4P55056 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC15.23■□□□□ 0.03
APOC4P55056 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC15.23■□□□□ 0.03
APOC4P55056 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 PTOV1-212ENST00000599732 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
APOC4P55056 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC4P55056 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC4P55056 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
APOC4P55056 AC069152.1-201ENST00000438030 544 ntBASIC15.22■□□□□ 0.03
APOC4P55056 GUSBP6-202ENST00000438529 1198 ntBASIC15.22■□□□□ 0.03
APOC4P55056 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC4P55056 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC15.22■□□□□ 0.03
APOC4P55056 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC15.22■□□□□ 0.03
APOC4P55056 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC4P55056 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC15.22■□□□□ 0.03
APOC4P55056 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC4P55056 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
APOC4P55056 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC15.22■□□□□ 0.03
APOC4P55056 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
APOC4P55056 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 AL117328.2-201ENST00000624617 1940 ntBASIC15.21■□□□□ 0.03
APOC4P55056 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC15.21■□□□□ 0.03
APOC4P55056 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 MFF-203ENST00000349901 1716 ntTSL 2 BASIC15.21■□□□□ 0.03
APOC4P55056 CEBPE-201ENST00000206513 1554 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 AC091799.1-201ENST00000422823 811 ntBASIC15.21■□□□□ 0.03
APOC4P55056 AC007322.3-201ENST00000426526 701 ntBASIC15.21■□□□□ 0.03
APOC4P55056 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 AC073210.2-201ENST00000430369 194 ntBASIC15.21■□□□□ 0.03
APOC4P55056 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC15.21■□□□□ 0.03
APOC4P55056 DENND3-207ENST00000518347 850 ntTSL 2 BASIC15.21■□□□□ 0.03
APOC4P55056 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC15.21■□□□□ 0.03
APOC4P55056 GAMT-205ENST00000640762 751 ntTSL 5 BASIC15.21■□□□□ 0.03
APOC4P55056 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
APOC4P55056 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
APOC4P55056 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
APOC4P55056 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.02
APOC4P55056 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
APOC4P55056 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOC4P55056 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.02
APOC4P55056 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC15.21■□□□□ 0.02
APOC4P55056 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
APOC4P55056 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
APOC4P55056 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms