Protein–RNA interactions for Protein: P53960

YNL040W, Putative alanyl-tRNA editing protein alaX, yeastyeast

Predicted RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL040WP53960 DNF1YER166W 4716 nt2.46□□□□□ -2.02
YNL040WP53960 BOI1YBL085W 2943 nt2.45□□□□□ -2.02
YNL040WP53960 HOP1YIL072W 1818 nt2.45□□□□□ -2.02
YNL040WP53960 SWR1YDR334W 4545 nt2.45□□□□□ -2.02
YNL040WP53960 SRB7YDR308C 423 nt2.45□□□□□ -2.02
YNL040WP53960 YKL065W-AYKL065W-A 222 nt2.45□□□□□ -2.02
YNL040WP53960 YKR070WYKR070W 1059 nt2.45□□□□□ -2.02
YNL040WP53960 YLR366WYLR366W 306 nt2.45□□□□□ -2.02
YNL040WP53960 PRM6YML047C 1059 nt2.45□□□□□ -2.02
YNL040WP53960 AIM32YML050W 936 nt2.45□□□□□ -2.02
YNL040WP53960 HAT1YPL001W 1125 nt2.45□□□□□ -2.02
YNL040WP53960 YPL135C-AYPL135C-A 174 nt2.45□□□□□ -2.02
YNL040WP53960 SIP3YNL257C 3690 nt2.44□□□□□ -2.02
YNL040WP53960 ERP3YDL018C 678 nt2.44□□□□□ -2.02
YNL040WP53960 FIN1YDR130C 876 nt2.44□□□□□ -2.02
YNL040WP53960 MAM1YER106W 909 nt2.44□□□□□ -2.02
YNL040WP53960 YFR057WYFR057W 456 nt2.44□□□□□ -2.02
YNL040WP53960 OST5YGL226C-A 261 nt2.44□□□□□ -2.02
YNL040WP53960 TCD1YHR003C 1290 nt2.44□□□□□ -2.02
YNL040WP53960 VMA10YHR039C-A 345 nt2.44□□□□□ -2.02
YNL040WP53960 YKL070WYKL070W 510 nt2.44□□□□□ -2.02
YNL040WP53960 YAL059C-AYAL059C-A 423 nt2.44□□□□□ -2.02
YNL040WP53960 CDC123YLR215C 1083 nt2.44□□□□□ -2.02
YNL040WP53960 INP1YMR204C 1263 nt2.44□□□□□ -2.02
YNL040WP53960 PDR17YNL264C 1053 nt2.44□□□□□ -2.02
YNL040WP53960 YNL276CYNL276C 396 nt2.44□□□□□ -2.02
YNL040WP53960 YOR283WYOR283W 693 nt2.44□□□□□ -2.02
YNL040WP53960 snR35snR35 204 nt2.44□□□□□ -2.02
YNL040WP53960 AIM4YBR194W 372 nt2.44□□□□□ -2.02
YNL040WP53960 RTG3YBL103C 1461 nt2.44□□□□□ -2.02
YNL040WP53960 YDR170W-AYDR170W-A 1323 nt2.43□□□□□ -2.02
YNL040WP53960 YBL005W-AYBL005W-A 1323 nt2.43□□□□□ -2.02
YNL040WP53960 YMR046CYMR046C 1323 nt2.43□□□□□ -2.02
YNL040WP53960 YNL284C-AYNL284C-A 1323 nt2.43□□□□□ -2.02
YNL040WP53960 SIN3YOL004W 4611 nt2.43□□□□□ -2.02
YNL040WP53960 AVT2YEL064C 1443 nt2.43□□□□□ -2.02
YNL040WP53960 GCD10YNL062C 1437 nt2.43□□□□□ -2.02
YNL040WP53960 TRA1YHR099W 11235 nt2.43□□□□□ -2.02
YNL040WP53960 OSW7YFR039C 1533 nt2.43□□□□□ -2.02
YNL040WP53960 YOL098CYOL098C 3114 nt2.43□□□□□ -2.02
YNL040WP53960 RGR1YLR071C 3249 nt2.43□□□□□ -2.02
YNL040WP53960 SEC4YFL005W 648 nt2.43□□□□□ -2.02
YNL040WP53960 COG7YGL005C 840 nt2.43□□□□□ -2.02
YNL040WP53960 GET1YGL020C 708 nt2.43□□□□□ -2.02
YNL040WP53960 PEX4YGR133W 552 nt2.43□□□□□ -2.02
YNL040WP53960 DSE2YHR143W 978 nt2.43□□□□□ -2.02
YNL040WP53960 SVP26YHR181W 687 nt2.43□□□□□ -2.02
YNL040WP53960 YHR212CYHR212C 336 nt2.43□□□□□ -2.02
YNL040WP53960 SGM1YJR134C 2124 nt2.43□□□□□ -2.02
YNL040WP53960 PSY1YKL076C 384 nt2.43□□□□□ -2.02
YNL040WP53960 YAL066WYAL066W 309 nt2.43□□□□□ -2.02
YNL040WP53960 YAR060CYAR060C 336 nt2.43□□□□□ -2.02
YNL040WP53960 REC102YLR329W 795 nt2.43□□□□□ -2.02
YNL040WP53960 MER1YNL210W 813 nt2.43□□□□□ -2.02
YNL040WP53960 MPP6YNR024W 561 nt2.43□□□□□ -2.02
YNL040WP53960 MPD2YOL088C 834 nt2.43□□□□□ -2.02
YNL040WP53960 THI80YOR143C 960 nt2.43□□□□□ -2.02
YNL040WP53960 SFG1YOR315W 1041 nt2.43□□□□□ -2.02
YNL040WP53960 PEX34YCL056C 435 nt2.43□□□□□ -2.02
YNL040WP53960 HSE1YHL002W 1359 nt2.43□□□□□ -2.02
YNL040WP53960 SCD5YOR329C 2619 nt2.42□□□□□ -2.02
YNL040WP53960 YNL193WYNL193W 1677 nt2.42□□□□□ -2.02
YNL040WP53960 YJL049WYJL049W 1353 nt2.42□□□□□ -2.02
YNL040WP53960 GUK1YDR454C 564 nt2.42□□□□□ -2.02
YNL040WP53960 MCR1YKL150W 909 nt2.42□□□□□ -2.02
YNL040WP53960 YLR169WYLR169W 354 nt2.42□□□□□ -2.02
YNL040WP53960 ADI1YMR009W 540 nt2.42□□□□□ -2.02
YNL040WP53960 RPL20AYMR242C 519 nt2.42□□□□□ -2.02
YNL040WP53960 YOR097CYOR097C 528 nt2.42□□□□□ -2.02
YNL040WP53960 YOR366WYOR366W 354 nt2.42□□□□□ -2.02
YNL040WP53960 PDS5YMR076C 3834 nt2.42□□□□□ -2.02
YNL040WP53960 YGL176CYGL176C 1665 nt2.41□□□□□ -2.02
YNL040WP53960 SCP160YJL080C 3669 nt2.41□□□□□ -2.02
YNL040WP53960 VMA7YGR020C 357 nt2.41□□□□□ -2.02
YNL040WP53960 COX6YHR051W 447 nt2.41□□□□□ -2.02
YNL040WP53960 YIL141WYIL141W 390 nt2.41□□□□□ -2.02
YNL040WP53960 PAU14YIL176C 363 nt2.41□□□□□ -2.02
YNL040WP53960 PAU1YJL223C 363 nt2.41□□□□□ -2.02
YNL040WP53960 SRL3YKR091W 741 nt2.41□□□□□ -2.02
YNL040WP53960 YNL226WYNL226W 411 nt2.41□□□□□ -2.02
YNL040WP53960 YNL319WYNL319W 441 nt2.41□□□□□ -2.02
YNL040WP53960 ATP3YBR039W 936 nt2.41□□□□□ -2.02
YNL040WP53960 VTC3YPL019C 2508 nt2.41□□□□□ -2.02
YNL040WP53960 TFB1YDR311W 1929 nt2.4□□□□□ -2.02
YNL040WP53960 BIT61YJL058C 1632 nt2.4□□□□□ -2.03
YNL040WP53960 NRG1YDR043C 696 nt2.4□□□□□ -2.03
YNL040WP53960 TVP15YDR100W 432 nt2.4□□□□□ -2.03
YNL040WP53960 CPR5YDR304C 678 nt2.4□□□□□ -2.03
YNL040WP53960 HPA3YEL066W 540 nt2.4□□□□□ -2.03
YNL040WP53960 CWC23YGL128C 852 nt2.4□□□□□ -2.03
YNL040WP53960 RSR1YGR152C 819 nt2.4□□□□□ -2.03
YNL040WP53960 YJL114WYJL114W 681 nt2.4□□□□□ -2.03
YNL040WP53960 END3YNL084C 1050 nt2.4□□□□□ -2.03
YNL040WP53960 ARF3YOR094W 552 nt2.4□□□□□ -2.03
YNL040WP53960 CUP9YPL177C 921 nt2.4□□□□□ -2.03
YNL040WP53960 YBR090CYBR090C 369 nt2.4□□□□□ -2.03
YNL040WP53960 NOP56YLR197W 1515 nt2.4□□□□□ -2.03
YNL040WP53960 YEF3YLR249W 3135 nt2.4□□□□□ -2.03
YNL040WP53960 YBP2YGL060W 1926 nt2.4□□□□□ -2.03
YNL040WP53960 TRM82YDR165W 1335 nt2.4□□□□□ -2.03
Retrieved 100 of 7,029 protein–RNA pairs in 35.6 ms