Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC25A1P53007 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC25A1P53007 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
SLC25A1P53007 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC18.48■□□□□ 0.55
SLC25A1P53007 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
SLC25A1P53007 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.48■□□□□ 0.55
SLC25A1P53007 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC25A1P53007 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC18.48■□□□□ 0.55
SLC25A1P53007 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC18.48■□□□□ 0.55
SLC25A1P53007 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SLC25A1P53007 AC027702.1-201ENST00000563810 1770 ntBASIC18.47■□□□□ 0.55
SLC25A1P53007 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
SLC25A1P53007 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 BID-203ENST00000399765 1879 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 KDM3B-201ENST00000314358 6813 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 AC020907.5-201ENST00000624372 1936 ntBASIC18.47■□□□□ 0.55
SLC25A1P53007 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC18.47■□□□□ 0.55
SLC25A1P53007 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
SLC25A1P53007 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SLC25A1P53007 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 POU5F1P4-201ENST00000413175 1085 ntBASIC18.46■□□□□ 0.55
SLC25A1P53007 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 AL358852.1-201ENST00000623174 1268 ntBASIC18.46■□□□□ 0.55
SLC25A1P53007 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.46■□□□□ 0.55
SLC25A1P53007 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SLC25A1P53007 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC25A1P53007 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC25A1P53007 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC25A1P53007 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
SLC25A1P53007 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SLC25A1P53007 NALT1-201ENST00000429224 738 ntTSL 5 BASIC18.45■□□□□ 0.54
SLC25A1P53007 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC25A1P53007 SUDS3P1-201ENST00000505831 966 ntBASIC18.45■□□□□ 0.54
SLC25A1P53007 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC18.45■□□□□ 0.54
SLC25A1P53007 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SLC25A1P53007 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
SLC25A1P53007 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC25A1P53007 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC25A1P53007 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC25A1P53007 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC25A1P53007 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.44■□□□□ 0.54
SLC25A1P53007 NT5C3AP1-201ENST00000394500 1012 ntBASIC18.44■□□□□ 0.54
SLC25A1P53007 MTURN-203ENST00000409688 843 ntTSL 2 BASIC18.44■□□□□ 0.54
SLC25A1P53007 AC008175.2-201ENST00000612840 297 ntBASIC18.44■□□□□ 0.54
SLC25A1P53007 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC25A1P53007 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC18.44■□□□□ 0.54
SLC25A1P53007 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SLC25A1P53007 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SLC25A1P53007 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
SLC25A1P53007 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC18.43■□□□□ 0.54
SLC25A1P53007 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 16.8 ms